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Author: Alexander van Oudenaarden

Rankings

  • All-time downloads: 50,354 (rank: 760 out of 396,068)
  • Categories:
    • bioinformatics: 3,412 (rank: 2,991 (tie) out of 33,673)
    • cell biology: 19,528 (rank: 12 out of 29,683)
    • developmental biology: 3,291 (rank: 330 out of 15,394)
    • genomics: 15,931 (rank: 604 (tie) out of 42,120)
    • molecular biology: 500 (rank: 8,406 (tie) out of 20,889)
    • systems biology: 7,692 (rank: 253 out of 11,567)

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Preprints

The Human Cell Atlas

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Characterization of directed differentiation by high-throughput single-cell RNA-Seq

genomics more details view paper
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    • In genomics: 39 out of 5,851
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Long-term expanding human airway organoids for disease modelling.

cell biology more details view paper
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    • In cell biology: 17 out of 4,781
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    • Site-wide: 8,432 out of 92,758

Massively parallel clonal analysis using CRISPR/Cas9 induced genetic scars

systems biology more details view paper
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Combined quantification of intracellular (phospho-)proteins and transcriptomics from fixed single cells.

genomics more details view paper
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    • In genomics: 476 out of 5,851
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Embryonic signals perpetuate polar-like trophoblast stem cells and pattern the blastocyst axis

developmental biology more details view paper
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    • In developmental biology: 39 out of 2,752
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Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells

systems biology more details view paper
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    • In systems biology: 73 out of 2,374
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Cell type purification by single-cell transcriptome-trained sorting

bioinformatics more details view paper
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    • In bioinformatics: 515 out of 8,685
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A metabolic switch from OXPHOS to glycolysis is essential for cardiomyocyte proliferation in the regenerating heart

cell biology more details view paper
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    • In cell biology: 207 out of 4,781
  • Year to date:
    • Site-wide: 14,996 out of 92,758
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    • Site-wide: 19,852 out of 92,758

Sharq, a versatile preprocessing and QC pipeline for Single Cell RNA-seq

bioinformatics more details view paper
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    • Site-wide: 10,981 out of 92,758
    • In bioinformatics: 1,782 out of 8,685
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  • Since beginning of last month:
    • Site-wide: 25,244 out of 92,758

Neuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics

developmental biology more details view paper
  • Downloaded 763 times
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    • In developmental biology: 437 out of 2,752
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    • Site-wide: 35,727 out of 92,758

Spatial transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes

genomics more details view paper
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    • In genomics: 2,306 out of 5,851
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    • Site-wide: 65,763 out of 92,758

Dynamics of Meiotic Sex Chromosome Inactivation and Pachytene Activation in Mice Spermatogenesis

genomics more details view paper
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    • In genomics: 2,434 out of 5,851
  • Year to date:
    • Site-wide: 15,119 out of 92,758
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    • Site-wide: 12,779 out of 92,758

Spindle checkpoint silencing at kinetochores with submaximal microtubule occupancy

cell biology more details view paper
  • Downloaded 584 times
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    • Site-wide: 26,827 out of 92,758
    • In cell biology: 1,243 out of 4,781
  • Year to date:
    • Site-wide: 58,051 out of 92,758
  • Since beginning of last month:
    • Site-wide: 69,587 out of 92,758

Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian development

genomics more details view paper
  • Downloaded 568 times
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    • Site-wide: 27,771 out of 92,758
    • In genomics: 2,915 out of 5,851
  • Year to date:
    • Site-wide: 14,776 out of 92,758
  • Since beginning of last month:
    • Site-wide: 17,317 out of 92,758

Tdrd6a regulates the aggregation of Buc into functional subcellular compartments that drive germ cell specification

molecular biology more details view paper
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    • Site-wide: 32,694 out of 92,758
    • In molecular biology: 1,061 out of 3,175
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    • Site-wide: 46,439 out of 92,758

Functional modules from variable genes: Leveraging percolation to analyze noisy, high-dimensional data

systems biology more details view paper
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    • In systems biology: 1,911 out of 2,374
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