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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 70,730 bioRxiv papers from 308,757 authors.

Author: Alexander van Oudenaarden

  • Most recently observed institution: Hubrecht Institute

Rankings

  • All-time downloads: 46,009 (rank: 333 out of 308,818)
  • Categories:
    • bioinformatics: 3,130 (rank: 2,430 (tie) out of 26,857)
    • cell biology: 18,176 (rank: 4 out of 21,352)
    • developmental biology: 2,459 (rank: 374 out of 11,825)
    • genomics: 14,580 (rank: 634 out of 34,868)
    • molecular biology: 444 (rank: 5,922 (tie) out of 15,095)
    • systems biology: 7,220 (rank: 43 out of 9,283)

Downloads per author, site-wide

Preprints

The Human Cell Atlas

cell biology more details view paper
  • Downloaded 11,841 times
  • Download rankings, all-time:
    • Site-wide: 91 out of 70,744
    • In cell biology: 3 out of 3,469
  • Year to date:
    • Site-wide: 18,738 out of 70,744
  • Since beginning of last month:
    • Site-wide: 8,299 out of 70,744

Characterization of directed differentiation by high-throughput single-cell RNA-Seq

genomics more details view paper
  • Downloaded 10,683 times
  • Download rankings, all-time:
    • Site-wide: 111 out of 70,744
    • In genomics: 32 out of 4,722
  • Year to date:
    • Site-wide: 4,146 out of 70,744
  • Since beginning of last month:
    • Site-wide: 4,045 out of 70,744

Massively parallel clonal analysis using CRISPR/Cas9 induced genetic scars

systems biology more details view paper
  • Downloaded 4,804 times
  • Download rankings, all-time:
    • Site-wide: 498 out of 70,744
    • In systems biology: 8 out of 1,948
  • Year to date:
    • Site-wide: 19,321 out of 70,744
  • Since beginning of last month:
    • Site-wide: 13,622 out of 70,744

Long-term expanding human airway organoids for disease modelling.

cell biology more details view paper
  • Downloaded 4,555 times
  • Download rankings, all-time:
    • Site-wide: 553 out of 70,744
    • In cell biology: 17 out of 3,469
  • Year to date:
    • Site-wide: 10,553 out of 70,744
  • Since beginning of last month:
    • Site-wide: 4,728 out of 70,744

Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells

systems biology more details view paper
  • Downloaded 2,416 times
  • Download rankings, all-time:
    • Site-wide: 1,850 out of 70,744
    • In systems biology: 46 out of 1,948
  • Year to date:
    • Site-wide: 61,622 out of 70,744
  • Since beginning of last month:
    • Site-wide: 64,873 out of 70,744

Combined quantification of intracellular (phospho-)proteins and transcriptomics from fixed single cells.

genomics more details view paper
  • Downloaded 2,412 times
  • Download rankings, all-time:
    • Site-wide: 1,857 out of 70,744
    • In genomics: 406 out of 4,722
  • Year to date:
    • Site-wide: 61,021 out of 70,744
  • Since beginning of last month:
    • Site-wide: 12,219 out of 70,744

Cell type purification by single-cell transcriptome-trained sorting

bioinformatics more details view paper
  • Downloaded 2,172 times
  • Download rankings, all-time:
    • Site-wide: 2,235 out of 70,744
    • In bioinformatics: 450 out of 6,926
  • Year to date:
    • Site-wide: 41,785 out of 70,744
  • Since beginning of last month:
    • Site-wide: 20,349 out of 70,744

Embryonic signals perpetuate polar-like trophoblast stem cells and pattern the blastocyst axis.

developmental biology more details view paper
  • Downloaded 1,766 times
  • Download rankings, all-time:
    • Site-wide: 3,183 out of 70,744
    • In developmental biology: 48 out of 2,114
  • Year to date:
    • Site-wide: 2,070 out of 70,744
  • Since beginning of last month:
    • Site-wide: 1,502 out of 70,744

A metabolic switch from OXPHOS to glycolysis is essential for cardiomyocyte proliferation in the regenerating heart

cell biology more details view paper
  • Downloaded 1,270 times
  • Download rankings, all-time:
    • Site-wide: 5,567 out of 70,744
    • In cell biology: 162 out of 3,469
  • Year to date:
    • Site-wide: 6,072 out of 70,744
  • Since beginning of last month:
    • Site-wide: 4,923 out of 70,744

Sharq, a versatile preprocessing and QC pipeline for Single Cell RNA-seq

bioinformatics more details view paper
  • Downloaded 958 times
  • Download rankings, all-time:
    • Site-wide: 8,918 out of 70,744
    • In bioinformatics: 1,539 out of 6,926
  • Year to date:
    • Site-wide: 11,304 out of 70,744
  • Since beginning of last month:
    • Site-wide: 20,480 out of 70,744

Neuromesodermal Progenitors are a Conserved Source of Spinal Cord with Divergent Growth Dynamics

developmental biology more details view paper
  • Downloaded 693 times
  • Download rankings, all-time:
    • Site-wide: 14,561 out of 70,744
    • In developmental biology: 335 out of 2,114
  • Year to date:
    • Site-wide: 22,548 out of 70,744
  • Since beginning of last month:
    • Site-wide: 37,952 out of 70,744

Spatial transcriptomics of C. elegans males and hermaphrodites identifies novel fertility genes

genomics more details view paper
  • Downloaded 669 times
  • Download rankings, all-time:
    • Site-wide: 15,310 out of 70,744
    • In genomics: 1,972 out of 4,722
  • Year to date:
    • Site-wide: 45,471 out of 70,744
  • Since beginning of last month:
    • Site-wide: 41,562 out of 70,744

Spindle checkpoint silencing at kinetochores with submaximal microtubule occupancy

cell biology more details view paper
  • Downloaded 510 times
  • Download rankings, all-time:
    • Site-wide: 22,161 out of 70,744
    • In cell biology: 1,007 out of 3,469
  • Year to date:
    • Site-wide: 56,835 out of 70,744
  • Since beginning of last month:
    • Site-wide: 43,515 out of 70,744

Dynamics of Meiotic Sex Chromosome Inactivation and Pachytene Activation in Mice Spermatogenesis

genomics more details view paper
  • Downloaded 475 times
  • Download rankings, all-time:
    • Site-wide: 24,231 out of 70,744
    • In genomics: 2,626 out of 4,722
  • Year to date:
    • Site-wide: 7,032 out of 70,744
  • Since beginning of last month:
    • Site-wide: 6,913 out of 70,744

Tdrd6a regulates the aggregation of Buc into functional subcellular compartments that drive germ cell specification

molecular biology more details view paper
  • Downloaded 444 times
  • Download rankings, all-time:
    • Site-wide: 26,286 out of 70,744
    • In molecular biology: 771 out of 2,272
  • Year to date:
    • Site-wide: 54,106 out of 70,744
  • Since beginning of last month:
    • Site-wide: 15,072 out of 70,744

Strand-specific single-cell methylomics reveals distinct modes of DNA demethylation dynamics during early mammalian development

genomics more details view paper
  • Downloaded 341 times
  • Download rankings, all-time:
    • Site-wide: 34,789 out of 70,744
    • In genomics: 3,300 out of 4,722
  • Year to date:
    • Site-wide: 13,597 out of 70,744
  • Since beginning of last month:
    • Site-wide: 7,778 out of 70,744

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