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Author: Ying Zhang

Rankings

  • All-time downloads: 91,099 (rank: 1,374 )
  • Categories:
    • biochemistry: 12,918 (rank: 135 )
    • bioinformatics: 2,406 (rank: 5,751 (tie) )
    • biophysics: 1,493 (rank: 2,916 (tie) )
    • cancer biology: 1,317 (rank: 5,414 (tie) )
    • cell biology: 2,460 (rank: 2,132 (tie) )
    • developmental biology: 964 (rank: 4,144 (tie) )
    • ecology: 106 (rank: 20,368 (tie) )
    • epidemiology: 4,168 (rank: 2,797 )
    • evolutionary biology: 598 (rank: 11,426 (tie) )
    • genetics: 888 (rank: 16,754 (tie) )
    • genomics: 15,340 (rank: 949 )
    • immunology: 749 (rank: 12,307 (tie) )
    • infectious diseases: 16,078 (rank: 2,854 )
    • microbiology: 21,686 (rank: 581 )
    • molecular biology: 2,291 (rank: 1,832 (tie) )
    • nephrology: 893 (rank: 220 (tie) )
    • neuroscience: 2,428 (rank: 8,666 (tie) )
    • physiology: 340 (rank: 4,931 (tie) )
    • public and global health: 2,419 (rank: 1,568 (tie) )
    • respiratory medicine: 518 (rank: 1,317 (tie) )
    • systems biology: 1,039 (rank: 4,215 )

Downloads per author, site-wide

Preprints

DEPDC1/ EEF1A1 complex promotes the progression of human osteosarcoma via downregulation of FOXO3a

cell biology more details view paper

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Proteomic and Metabolomic Characterization of COVID-19 Patient Sera

infectious diseases more details view paper
  • Downloaded 12,875 times
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    • Site-wide: 566
    • In infectious diseases: 191
  • Year to date:
    • Site-wide: 7,678
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    • Site-wide: 8,530

Structure of RNA-dependent RNA polymerase from 2019-nCoV, a major antiviral drug target

biochemistry more details view paper
  • Downloaded 10,116 times
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    • Site-wide: 795
    • In biochemistry: 8
  • Year to date:
    • Site-wide: 4,730
  • Since beginning of last month:
    • Site-wide: 4,927

Computational Pan-Genomics: Status, Promises and Challenges

genomics more details view paper
  • Downloaded 4,632 times
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    • Site-wide: 2,216
    • In genomics: 240
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    • Site-wide: 27,016
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    • Site-wide: 35,613

Evaluation of Natural and Botanical Medicines for Activity against Growing and Non-growing Forms of B. burgdorferi

microbiology more details view paper
  • Downloaded 4,134 times
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    • Site-wide: 2,600
    • In microbiology: 188
  • Year to date:
    • Site-wide: 8,240
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    • Site-wide: 10,762

High Activity Of Selective Essential Oils Against Stationary Phase Borrelia burgdorferi As A Persister Model

microbiology more details view paper
  • Downloaded 3,331 times
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    • Site-wide: 3,564
    • In microbiology: 235
  • Year to date:
    • Site-wide: 44,990
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    • Site-wide: 54,635

De novo assembly and phasing of dikaryotic genomes from two isolates of Puccinia coronata f. sp. avenae, the causal agent of oat crown rust

genomics more details view paper
  • Downloaded 3,155 times
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    • Site-wide: 3,861
    • In genomics: 435
  • Year to date:
    • Site-wide: 94,054
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    • Site-wide: 73,964

Genome-wide characterization of PRE-1 reveals a hidden evolutionary relationship between suidae and primates

genomics more details view paper
  • Downloaded 2,295 times
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    • Site-wide: 6,128
    • In genomics: 694
  • Year to date:
    • Site-wide: 48,376
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    • Site-wide: 46,646

An in-depth investigation of the safety and immunogenicity of an inactivated SARS-CoV-2 vaccine

public and global health more details view paper
  • Downloaded 2,247 times
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    • Site-wide: 6,307
    • In public and global health: 163
  • Year to date:
    • Site-wide: 1,482
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    • Site-wide: 2,704

A thermostable, closed, SARS-CoV-2 spike protein trimer.

biochemistry more details view paper
  • Downloaded 1,884 times
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    • Site-wide: 8,182
    • In biochemistry: 156
  • Year to date:
    • Site-wide: 14,525
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    • Site-wide: 16,068

H3K27me3-rich genomic regions can function as silencers to repress gene expression via chromatin interactions

genomics more details view paper
  • Downloaded 1,777 times
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    • Site-wide: 8,941
    • In genomics: 974
  • Year to date:
    • Site-wide: 20,700
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    • Site-wide: 26,205

Template switching causes artificial junction formation and false identification of circular RNAs

molecular biology more details view paper
  • Downloaded 1,666 times
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    • Site-wide: 9,842
    • In molecular biology: 263
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    • Site-wide: 37,667
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    • Site-wide: 26,327

Biofilm/Persister/Stationary Phase Bacteria Cause More Severe Disease Than Log Phase Bacteria I Biofilm Borrelia burgdorferi Not Only Display More Tolerance to Lyme Antibiotics But Also Cause More Severe Pathology In a Mouse Arthritis Model: Implications for Understanding Persistence, PTLDS and Treatment Failure

microbiology more details view paper
  • Downloaded 1,597 times
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    • Site-wide: 10,469
    • In microbiology: 591
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    • Site-wide: 34,119
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    • Site-wide: 37,417

Additional Essential Oils with High Activity against Stationary Phase Borrelia burgdorferi

microbiology more details view paper
  • Downloaded 1,571 times
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    • Site-wide: 10,728
    • In microbiology: 601
  • Year to date:
    • Site-wide: 58,044
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    • Site-wide: 73,769

The Genome of the Zebra Mussel, Dreissena polymorpha: A Resource for Invasive Species Research

genomics more details view paper
  • Downloaded 1,543 times
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    • Site-wide: 11,015
    • In genomics: 1,192
  • Year to date:
    • Site-wide: 19,220
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    • Site-wide: 15,439

SARS-CoV-2 Nsp1 suppresses host but not viral translation through a bipartite mechanism

cell biology more details view paper
  • Downloaded 1,446 times
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    • Site-wide: 12,087
    • In cell biology: 337
  • Year to date:
    • Site-wide: 3,681
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    • Site-wide: 3,411

Efficacy and tolerability of bevacizumab in patients with severe Covid -19

infectious diseases more details view paper
  • Downloaded 1,425 times
  • Download rankings, all-time:
    • Site-wide: 12,388
    • In infectious diseases: 1,336
  • Year to date:
    • Site-wide: 9,101
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    • Site-wide: 18,136

Identification of essential oils with activity against stationary phase Staphylococcus aureus

microbiology more details view paper
  • Downloaded 1,399 times
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    • Site-wide: 12,726
    • In microbiology: 720
  • Year to date:
    • Site-wide: 11,355
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    • Site-wide: 14,673

Baseline characteristics, management, and outcomes of 55,270 children and adolescents diagnosed with COVID-19 and 1,952,693 with influenza in France, Germany, Spain, South Korea and the United States: an international network cohort study

epidemiology more details view paper
  • Downloaded 1,360 times
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    • Site-wide: 13,302
    • In epidemiology: 887
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    • Site-wide: 5,937
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    • Site-wide: 6,052

SARS-Coronavirus-2 nucleocapsid protein measured in blood using a Simoa ultra-sensitive immunoassay differentiates COVID-19 infection with high clinical sensitivity.

infectious diseases more details view paper
  • Downloaded 1,310 times
  • Download rankings, all-time:
    • Site-wide: 14,076
    • In infectious diseases: 1,433
  • Year to date:
    • Site-wide: 9,042
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    • Site-wide: 11,453

Identification of essential oils with strong activity against stationary phase uropathogenic Escherichia coli

microbiology more details view paper
  • Downloaded 1,170 times
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    • Site-wide: 16,684
    • In microbiology: 949
  • Year to date:
    • Site-wide: 8,243
  • Since beginning of last month:
    • Site-wide: 9,386

Discovering in vivo cytokine eQTL interactions from a lupus clinical trial

genomics more details view paper
  • Downloaded 1,130 times
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    • Site-wide: 17,555
    • In genomics: 1,802
  • Year to date:
    • Site-wide: 99,762
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    • Site-wide: 91,646

Predicting chromatin interactions between open chromatin regions from DNA sequences

bioinformatics more details view paper
  • Downloaded 1,004 times
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    • Site-wide: 20,877
    • In bioinformatics: 2,485
  • Year to date:
    • Site-wide: 42,030
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    • Site-wide: 63,312

The Chronic Kidney Disease and Acute Kidney Injury Involvement in COVID-19 Pandemic: A Systematic Review and Meta-analysis

nephrology more details view paper
  • Downloaded 893 times
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    • Site-wide: 24,766
    • In nephrology: 10
  • Year to date:
    • Site-wide: 31,377
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    • Site-wide: 38,230

Local and global chromatin interactions are altered by large genomic deletions associated with human brain development

genetics more details view paper
  • Downloaded 888 times
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    • Site-wide: 24,999
    • In genetics: 1,207
  • Year to date:
    • Site-wide: 115,765
  • Since beginning of last month:
    • Site-wide: 114,680

Heterogeneity and temporal variation in the management of COVID-19: a multinational drug utilization study including 71,921 hospitalized patients from China, South Korea, Spain, and the United States of America

epidemiology more details view paper
  • Downloaded 851 times
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    • Site-wide: 26,509
    • In epidemiology: 1,442
  • Year to date:
    • Site-wide: 14,105
  • Since beginning of last month:
    • Site-wide: 18,811

Chinese Glioma Genome Atlas (CGGA): A Comprehensive Resource with Functional Genomic Data for Chinese Glioma Patients

genomics more details view paper
  • Downloaded 808 times
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    • Site-wide: 28,454
    • In genomics: 2,626
  • Year to date:
    • Site-wide: 8,700
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    • Site-wide: 9,690

High-throughput single-particle tracking reveals nested membrane nanodomain organization that dictates Ras diffusion and trafficking

biophysics more details view paper
  • Downloaded 787 times
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    • Site-wide: 29,557
    • In biophysics: 889
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    • Site-wide: 70,215
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    • Site-wide: 61,869

An Array of 60,000 Antibodies for Proteome-Scale Antibody Generation and Target Discovery

systems biology more details view paper
  • Downloaded 761 times
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    • Site-wide: 30,958
    • In systems biology: 687
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    • Site-wide: 91,885
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    • Site-wide: 80,731

Mutations in efflux pump Rv1258c (Tap) cause resistance to pyrazinamide and other drugs in M. tuberculosis

microbiology more details view paper
  • Downloaded 750 times
  • Download rankings, all-time:
    • Site-wide: 31,558
    • In microbiology: 1,874
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    • Site-wide: 102,196
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    • Site-wide: 108,015

A valid protective immune response elicited in rhesus macaques by an inactivated vaccine is capable of defending against SARS-CoV-2 infection

immunology more details view paper
  • Downloaded 749 times
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    • Site-wide: 31,618
    • In immunology: 909
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    • Site-wide: 35,948
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    • Site-wide: 34,679

The influence of molecular reach and diffusivity on the efficacy of membrane-confined reactions

biophysics more details view paper
  • Downloaded 706 times
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    • Site-wide: 34,280
    • In biophysics: 1,088
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    • Site-wide: 117,036
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    • Site-wide: 121,402

Biofilm/Persister/Stationary Phase Bacteria Cause More Severe Disease Than Log Phase Bacteria II Infection with Persister Forms of Staphylococcus aureus Causes a Chronic Persistent Skin Infection with More Severe Lesion that Takes Longer to Heal and is not Eradicated by the Current Recommended Treatment in Mice

microbiology more details view paper
  • Downloaded 691 times
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    • Site-wide: 35,338
    • In microbiology: 2,114
  • Year to date:
    • Site-wide: 70,019
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    • Site-wide: 50,069

Molecular evolution of SARS-CoV-2 structural genes: evidence of positive selection in spike glycoprotein

evolutionary biology more details view paper
  • Downloaded 598 times
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    • Site-wide: 42,649
    • In evolutionary biology: 2,222
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    • Site-wide: 32,648
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    • Site-wide: 28,985

The Role of Weather Conditions in COVID-19 Transmission: A Study of a Global Panel of 1236 Regions

epidemiology more details view paper
  • Downloaded 595 times
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    • Site-wide: 42,861
    • In epidemiology: 2,032
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    • Site-wide: 54,469
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    • Site-wide: 64,149

Activity of Sulfa Drugs and Their Combinations against Stationary Phase B. burgdorferi in vitro

microbiology more details view paper
  • Downloaded 572 times
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    • Site-wide: 44,964
    • In microbiology: 2,791
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    • Site-wide: 111,156
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    • Site-wide: 89,229

TP63, SOX2 and KLF5 Establish Core Regulatory Circuitry and Construct Cancer Specific Epigenome in Esophageal Squamous Cell Carcinoma

cancer biology more details view paper
  • Downloaded 562 times
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    • Site-wide: 46,072
    • In cancer biology: 1,295
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    • Site-wide: 44,976

A Validation Study for the Successful Isolation Policy in China: a Meta-Analysis in COVID-19

respiratory medicine more details view paper
  • Downloaded 518 times
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    • Site-wide: 50,717
    • In respiratory medicine: 100
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A comprehensive plasma metabolomics dataset for a cohort of mouse knockouts within the international mouse phenotyping consortium

bioinformatics more details view paper
  • Downloaded 500 times
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    • Site-wide: 52,807
    • In bioinformatics: 5,387
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    • Site-wide: 44,932
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Identification of a Novel Gene argJ involved in Arginine Biosynthesis Critical for Persister Formation in Staphylococcus aureus

microbiology more details view paper
  • Downloaded 491 times
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    • Site-wide: 53,953
    • In microbiology: 3,454
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    • Site-wide: 111,159
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    • Site-wide: 106,245

Variation in genome content and predatory phenotypes between Bdellovibrio sp. NC01 isolated from soil and B. bacteriovorus type strain HD100

microbiology more details view paper
  • Downloaded 488 times
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    • Site-wide: 54,360
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    • Site-wide: 68,060
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    • Site-wide: 107,272

Role of DNA Methylation in Persister Formation in Uropathogenic E. coli

microbiology more details view paper
  • Downloaded 477 times
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    • Site-wide: 55,735
    • In microbiology: 3,607
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    • Site-wide: 30,431
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    • Site-wide: 29,833

Crosstalk between invadopodia and the extracellular matrix

cancer biology more details view paper
  • Downloaded 469 times
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    • Site-wide: 56,845
    • In cancer biology: 1,616
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    • Site-wide: 32,776
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    • Site-wide: 25,980

Baseline phenotype and 30-day outcomes of people tested for COVID-19: an international network cohort including >3.32 million people tested with real-time PCR and >219,000 tested positive for SARS-CoV-2 in South Korea, Spain and the United States

infectious diseases more details view paper
  • Downloaded 468 times
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    • Site-wide: 56,901
    • In infectious diseases: 2,830
  • Year to date:
    • Site-wide: 19,113
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    • Site-wide: 19,660

Collaborative Cohort of Cohorts for COVID-19 Research (C4R) Study: Study Design

epidemiology more details view paper
  • Downloaded 460 times
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    • Site-wide: 57,909
    • In epidemiology: 2,515
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    • Site-wide: 3,363
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    • Site-wide: 986

Modeling the relative role of human mobility, land-use and climate factors on dengue outbreak emergence in Sri Lanka

epidemiology more details view paper
  • Downloaded 449 times
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    • Site-wide: 59,478
    • In epidemiology: 2,578
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    • Site-wide: 94,443
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    • Site-wide: 97,743

Specific miRNA-GPCR networks regulate Sox9a/Sox9b activities to promote gonadal renewal in zebrafish

developmental biology more details view paper
  • Downloaded 440 times
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    • Site-wide: 60,693
    • In developmental biology: 1,509
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    • Site-wide: 91,115
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    • Site-wide: 89,475

A dynamic role for dopamine receptors in the control of mammalian spinal networks

neuroscience more details view paper
  • Downloaded 425 times
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    • Site-wide: 62,885
    • In neuroscience: 9,484
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    • Site-wide: 61,466
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    • Site-wide: 57,942

Identification of disease resistance genes from a Chinese wild grapevine (Vitis davidii) by analysing grape transcriptomes and transgenic Arabidopsis

molecular biology more details view paper
  • Downloaded 420 times
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    • Site-wide: 63,701
    • In molecular biology: 1,835
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    • Site-wide: 124,075
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    • Site-wide: 129,068

Cyclin B3 is specifically required for metaphase to anaphase transition in mouse oocyte meiosis I

cell biology more details view paper
  • Downloaded 416 times
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    • Site-wide: 64,232
    • In cell biology: 2,878
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    • Site-wide: 101,537
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    • Site-wide: 106,588

Clofazimine targets essential nucleoid associated protein, mycobacterial integration host factor (mIHF), in Mycobacterium tuberculosis

microbiology more details view paper
  • Downloaded 406 times
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    • Site-wide: 65,841
    • In microbiology: 4,405
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    • Site-wide: 75,311
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    • Site-wide: 61,539

The circulating lipidome is largely defined by sex descriptors in the GOLDN, GeneBank and the ADNI studies

biochemistry more details view paper
  • Downloaded 396 times
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    • Site-wide: 67,535
    • In biochemistry: 1,850
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    • Site-wide: 30,908

Integrative Modeling of a Sin3/HDAC Complex Sub-structure

biochemistry more details view paper
  • Downloaded 395 times
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    • Site-wide: 67,695
    • In biochemistry: 1,853
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    • Site-wide: 82,597

Identification of drug candidates that enhance pyrazinamide activity from a clinical drug library

microbiology more details view paper
  • Downloaded 391 times
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    • Site-wide: 68,308
    • In microbiology: 4,606
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Organized cannabinoid receptor distribution in neurons revealed by super-resolution fluorescence imaging

neuroscience more details view paper
  • Downloaded 374 times
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    • Site-wide: 71,186
    • In neuroscience: 10,832
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    • Site-wide: 79,605
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    • Site-wide: 124,653

Identification of small regulatory RNAs involved in persister formation

microbiology more details view paper
  • Downloaded 372 times
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    • Site-wide: 71,473
    • In microbiology: 4,873
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    • Site-wide: 84,203
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    • Site-wide: 63,083

Proteomic Analyses of Morphological Variants of Borrelia burgdorferi Shed New Light on Persistence Mechanisms: Implications for Pathogenesis, Diagnosis and Treatment

microbiology more details view paper
  • Downloaded 365 times
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    • Site-wide: 72,650
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    • Site-wide: 109,615

Cooperation-based sperm clusters mediate sperm oviduct entry and fertilization

developmental biology more details view paper
  • Downloaded 359 times
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    • Site-wide: 73,838
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ErbB4 deletion in noradrenergic neurons in the locus coeruleus induces mania-like behavior via elevated catecholamines

neuroscience more details view paper
  • Downloaded 357 times
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    • Site-wide: 74,236
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    • Site-wide: 95,293
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    • Site-wide: 79,710

Identification of novel genes including rpmF and yjjQ critical for Type II persister formation in Escherichia coli

microbiology more details view paper
  • Downloaded 352 times
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    • Site-wide: 74,992
    • In microbiology: 5,134
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Identification of Polynucleotide Phosphorylase (PNPase) in Escherichia coli Involved in Persister Formation

microbiology more details view paper
  • Downloaded 350 times
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    • Site-wide: 75,318
    • In microbiology: 5,168
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    • Site-wide: 129,372

A Drug Combination Approach Targeting Both Growing Bacteria and Dormant Persisters Eradicate Persistent Staphylococcus aureus Biofilm Infection

microbiology more details view paper
  • Downloaded 346 times
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    • Site-wide: 76,114
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    • Site-wide: 84,162
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    • Site-wide: 57,888

Identification of novel mutations associated with clofazimine resistance in Mycobacterium abscessus

microbiology more details view paper
  • Downloaded 340 times
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    • Site-wide: 77,298
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    • Site-wide: 112,005
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    • Site-wide: 121,048

The evolving systemic biomarker milieu in obese ZSF1 rat model of human cardiometabolic syndrome: Characterization of the model and cardioprotective effect of GDF15

physiology more details view paper
  • Downloaded 340 times
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    • Site-wide: 77,381
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Chromatin Interaction Neural Network (ChINN): A machine learning-based method for predicting chromatin interactions from DNA sequences

bioinformatics more details view paper
  • Downloaded 339 times
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    • Site-wide: 77,528
    • In bioinformatics: 7,149
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    • Site-wide: 6,103
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    • Site-wide: 13,376

Spinal V3 interneurons and left-right coordination in mammalian locomotion

neuroscience more details view paper
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    • Site-wide: 78,950
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UNC-45A is preferentially expressed in epithelial cells and binds to and co-localizes with interphase MTs

cell biology more details view paper
  • Downloaded 328 times
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    • Site-wide: 79,528
    • In cell biology: 3,676
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Identification of Genes Regulating Cell Death in Staphylococcus aureus

microbiology more details view paper
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Varying Effects of Common Tuberculosis Drugs on Enhancing Clofazimine Activity in vitro

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MGMT genomic rearrangements contribute to chemotherapy resistance in gliomas

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Protein kinase CK2 alpha prime and alpha-synuclein constitute a key regulatory pathway in Huntington′s disease

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Driving Integrative Structural Modeling with Serial Capture Affinity Purification

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Development of a novel signature of long noncoding RNAs as a prognostic biomarker for esophageal cancer

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Botanical Medicines with Activity against Stationary Phase Bartonella henselae

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Identification of novel mutations in LprG (rv1411c), rv0521, rv3630, rv0010c, ppsC, cyp128 associated with pyrazinoic acid/pyrazinamide resistance in Mycobacterium tuberculosis

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Local brainstem circuits contribute to reticulospinal output in the mouse

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Characteristics and outcomes of 118,155 COVID-19 individuals with a history of cancer in the United States and Spain

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Introducing RpsA Point Mutation Δ438A or D123A into the Chromosome of M. tuberculosis Confirms its Role in Causing Resistance to Pyrazinamide

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Ranking of Major Classes of Antibiotics for Activity against Stationary Phase Pseudomonas aeruginosa and Identification of Clinafloxacin + Cefuroxime + Gentamicin Drug Combination that Eradicates Persistent P. aeruginosa Infection in a Murine Cystic Fibrosis Model

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Histone demethylase complexes KDM3A and KDM3B cooperate with OCT4/SOX2 to construct pluripotency gene regulatory network

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Fibroblast Protection of Borrelia burgdorferi from Doxycycline, Cefuroxime and Daptomycin Combination is Eliminated by Oregano or Carvacrol Essential Oil

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A Novel LysR-Type Global Regulator RpvA Controls Persister Formation and Virulence in Staphylococcus aureus

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FARCI: Fast and Robust Connectome Inference

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Extensive MET alterations confer clinical response to MET inhibitors in gliomas

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Identifying the diagnostic value of microRNA-421 in gastric cancer patients: a meta-analysis

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Self-reported sleep duration and timing: A methodological review of event definitions, context, and timeframe of related questions

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Genome-wide binding analyses of HOXB1 revealed a novel DNA binding motif associated with gene repression

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DLDTI: A learning-based framework for identification of drug-target interaction using neural networks and network representation

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Diversity and Function of the Eastern Oyster (Crassostrea virginica) Microbiome

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The plasticity of the pyruvate dehydrogenase complex confers a labile structure that is associated with its catalytic activity

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Proteome plasticity in response to persistent environmental change

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Species composition and dynamics of aphids and parasitoid wasps in maize fields in Northeastern China

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miRNA-dependent poly(A) length control in uncoupling transcription and translation of haploid male germ cells

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Low oxygen arrests Babesia duncani schizonts and leads to increased drug susceptibilities in hamster erythrocytes

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Integrin α6 upregulation in nucleus pulposus cell under high oxygen tension attenuates intervertebral disc degeneration

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