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Author: Chris Barnes

Rankings

  • All-time downloads: 23,727 (rank: 2,302 out of 404,161)
  • Categories:
    • bioinformatics: 3,016 (rank: 3,546 out of 34,272)
    • cancer biology: 7,557 (rank: 209 out of 28,183)
    • microbiology: 1,402 (rank: 6,366 (tie) out of 46,811)
    • synthetic biology: 5,765 (rank: 103 out of 4,220)
    • systems biology: 5,987 (rank: 465 (tie) out of 11,761)

Downloads per author, site-wide

Preprints

Mechanistic modelling and Bayesian inference elucidates the variable dynamics of double-strand break repair

systems biology more details view paper
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    • In systems biology: 23 out of 2,425
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    • Site-wide: 5,279 out of 94,912
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    • Site-wide: 63,330 out of 94,912

Quantification of subclonal selection in cancer from bulk sequencing data

cancer biology more details view paper
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    • In cancer biology: 55 out of 3,367
  • Year to date:
    • Site-wide: 20,222 out of 94,912
  • Since beginning of last month:
    • Site-wide: 25,631 out of 94,912

Evolutionary dynamics of neoantigens in growing tumours

cancer biology more details view paper
  • Downloaded 2,403 times
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    • In cancer biology: 65 out of 3,367
  • Year to date:
    • Site-wide: 7,222 out of 94,912
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    • Site-wide: 5,495 out of 94,912

Model-based tumor subclonal reconstruction

bioinformatics more details view paper
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    • In bioinformatics: 562 out of 8,837
  • Year to date:
    • Site-wide: 3,042 out of 94,912
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    • Site-wide: 4,371 out of 94,912

Modelling microbiome recovery after antibiotics using a stability landscape framework

microbiology more details view paper
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    • In microbiology: 443 out of 8,320
  • Year to date:
    • Site-wide: 40,122 out of 94,912
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    • Site-wide: 43,801 out of 94,912

Measuring single cell divisions in human cancers from multi-region sequencing data

cancer biology more details view paper
  • Downloaded 1,378 times
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    • Site-wide: 7,217 out of 94,912
    • In cancer biology: 192 out of 3,367
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    • Site-wide: 82,823 out of 94,912

Deep reinforcement learning for the control of microbial co-cultures in bioreactors

synthetic biology more details view paper
  • Downloaded 1,297 times
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    • Site-wide: 7,993 out of 94,912
    • In synthetic biology: 119 out of 885
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    • Site-wide: 14,318 out of 94,912
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    • Site-wide: 14,238 out of 94,912

A statistical approach reveals designs for the most robust stochastic gene oscillators

synthetic biology more details view paper
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    • Site-wide: 8,049 out of 94,912
    • In synthetic biology: 120 out of 885
  • Year to date:
    • Site-wide: 46,706 out of 94,912
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    • Site-wide: 44,532 out of 94,912

An acetoacetate-inducible bacterial sensor

synthetic biology more details view paper
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    • Site-wide: 8,867 out of 94,912
    • In synthetic biology: 141 out of 885
  • Year to date:
    • Site-wide: 37,446 out of 94,912
  • Since beginning of last month:
    • Site-wide: 40,653 out of 94,912

Reply: Neutral tumor evolution?

cancer biology more details view paper
  • Downloaded 926 times
  • Download rankings, all-time:
    • Site-wide: 13,848 out of 94,912
    • In cancer biology: 396 out of 3,367
  • Year to date:
    • Site-wide: 48,858 out of 94,912
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    • Site-wide: 61,292 out of 94,912

Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios

bioinformatics more details view paper
  • Downloaded 752 times
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    • Site-wide: 19,141 out of 94,912
    • In bioinformatics: 2,841 out of 8,837
  • Year to date:
    • Site-wide: 30,843 out of 94,912
  • Since beginning of last month:
    • Site-wide: 59,074 out of 94,912

Single strain control of microbial consortia

synthetic biology more details view paper
  • Downloaded 630 times
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    • Site-wide: 24,764 out of 94,912
    • In synthetic biology: 396 out of 885
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 2,692 out of 94,912

Origins of cell-to-cell variability, kinetic proof-reading and the robustness of MAPK signal transduction

systems biology more details view paper
  • Downloaded 614 times
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    • Site-wide: 25,701 out of 94,912
    • In systems biology: 728 out of 2,425
  • Year to date:
    • Site-wide: 89,228 out of 94,912
  • Since beginning of last month:
    • Site-wide: 75,799 out of 94,912

A Bayesian framework for the analysis of systems biology models of the brain

systems biology more details view paper
  • Downloaded 601 times
  • Download rankings, all-time:
    • Site-wide: 26,449 out of 94,912
    • In systems biology: 745 out of 2,425
  • Year to date:
    • Site-wide: 24,674 out of 94,912
  • Since beginning of last month:
    • Site-wide: 18,494 out of 94,912

Two new plasmid post-segregational killing mechanisms for the implementation of synthetic gene networks in E. coli

synthetic biology more details view paper
  • Downloaded 569 times
  • Download rankings, all-time:
    • Site-wide: 28,394 out of 94,912
    • In synthetic biology: 436 out of 885
  • Year to date:
    • Site-wide: 53,309 out of 94,912
  • Since beginning of last month:
    • Site-wide: 44,686 out of 94,912

Detecting changes in the Caenorhabditis elegans intestinal environment using an engineered bacterial biosensor

synthetic biology more details view paper
  • Downloaded 404 times
  • Download rankings, all-time:
    • Site-wide: 42,764 out of 94,912
    • In synthetic biology: 600 out of 885
  • Year to date:
    • Site-wide: 60,772 out of 94,912
  • Since beginning of last month:
    • Site-wide: 65,094 out of 94,912

Automated design of synthetic microbial communities

synthetic biology more details view paper
  • Downloaded 223 times
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    • Site-wide: 69,317 out of 94,912
    • In synthetic biology: 786 out of 885
  • Year to date:
    • Site-wide: 18,408 out of 94,912
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    • Site-wide: 2,027 out of 94,912

FlopR: An open source software package for calibration and normalization of plate reader and flow cytometry data

synthetic biology more details view paper
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    • Site-wide: 84,238 out of 94,912
    • In synthetic biology: 846 out of 885
  • Year to date:
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  • Since beginning of last month:
    • Site-wide: 24,370 out of 94,912

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