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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 71,082 bioRxiv papers from 310,116 authors.

Author: Chris P. Barnes

Rankings

  • All-time downloads: 20,113 (rank: 1,508 out of 309,945)
  • Categories:
    • bioinformatics: 2,212 (rank: 3,718 (tie) out of 26,916)
    • cancer biology: 6,768 (rank: 161 (tie) out of 20,248)
    • microbiology: 1,296 (rank: 2,871 (tie) out of 32,198)
    • synthetic biology: 4,429 (rank: 96 out of 3,087)
    • systems biology: 5,408 (rank: 149 out of 9,304)

Downloads per author, site-wide

Preprints

Mechanistic modelling and Bayesian inference elucidates the variable dynamics of double-strand break repair

systems biology more details view paper
  • Downloaded 4,401 times
  • Download rankings, all-time:
    • Site-wide: 601 out of 71,037
    • In systems biology: 13 out of 1,954
  • Year to date:
    • Site-wide: 731 out of 71,037
  • Since beginning of last month:
    • Site-wide: 469 out of 71,037

Quantification of subclonal selection in cancer from bulk sequencing data

cancer biology more details view paper
  • Downloaded 2,655 times
  • Download rankings, all-time:
    • Site-wide: 1,551 out of 71,037
    • In cancer biology: 43 out of 2,412
  • Year to date:
    • Site-wide: 20,485 out of 71,037
  • Since beginning of last month:
    • Site-wide: 10,473 out of 71,037

Evolutionary dynamics of neoantigens in growing tumours

cancer biology more details view paper
  • Downloaded 2,028 times
  • Download rankings, all-time:
    • Site-wide: 2,532 out of 71,037
    • In cancer biology: 61 out of 2,412
  • Year to date:
    • Site-wide: 4,245 out of 71,037
  • Since beginning of last month:
    • Site-wide: 6,103 out of 71,037

Model-based tumor subclonal reconstruction

bioinformatics more details view paper
  • Downloaded 1,587 times
  • Download rankings, all-time:
    • Site-wide: 3,833 out of 71,037
    • In bioinformatics: 759 out of 6,943
  • Year to date:
    • Site-wide: 3,093 out of 71,037
  • Since beginning of last month:
    • Site-wide: 3,914 out of 71,037

Modelling microbiome recovery after antibiotics using a stability landscape framework

microbiology more details view paper
  • Downloaded 1,296 times
  • Download rankings, all-time:
    • Site-wide: 5,399 out of 71,037
    • In microbiology: 192 out of 5,765
  • Year to date:
    • Site-wide: 15,737 out of 71,037
  • Since beginning of last month:
    • Site-wide: 37,827 out of 71,037

Measuring single cell divisions in human cancers from multi-region sequencing data

cancer biology more details view paper
  • Downloaded 1,256 times
  • Download rankings, all-time:
    • Site-wide: 5,697 out of 71,037
    • In cancer biology: 152 out of 2,412
  • Year to date:
    • Site-wide: 11,486 out of 71,037
  • Since beginning of last month:
    • Site-wide: 9,027 out of 71,037

A statistical approach reveals designs for the most robust stochastic gene oscillators

synthetic biology more details view paper
  • Downloaded 1,203 times
  • Download rankings, all-time:
    • Site-wide: 6,134 out of 71,037
    • In synthetic biology: 93 out of 675
  • Year to date:
    • Site-wide: 14,524 out of 71,037
  • Since beginning of last month:
    • Site-wide: 13,172 out of 71,037

An acetoacetate-inducible bacterial sensor

synthetic biology more details view paper
  • Downloaded 1,115 times
  • Download rankings, all-time:
    • Site-wide: 6,986 out of 71,037
    • In synthetic biology: 106 out of 675
  • Year to date:
    • Site-wide: 8,318 out of 71,037
  • Since beginning of last month:
    • Site-wide: 55,415 out of 71,037

Deep reinforcement learning for the control of microbial co-cultures in bioreactors

synthetic biology more details view paper
  • Downloaded 1,062 times
  • Download rankings, all-time:
    • Site-wide: 7,533 out of 71,037
    • In synthetic biology: 118 out of 675
  • Year to date:
    • Site-wide: 6,730 out of 71,037
  • Since beginning of last month:
    • Site-wide: 10,324 out of 71,037

Reply: Neutral tumor evolution?

cancer biology more details view paper
  • Downloaded 829 times
  • Download rankings, all-time:
    • Site-wide: 11,252 out of 71,037
    • In cancer biology: 332 out of 2,412
  • Year to date:
    • Site-wide: 63,700 out of 71,037
  • Since beginning of last month:
    • Site-wide: 60,956 out of 71,037

Measuring the distribution of fitness effects in somatic evolution by combining clonal dynamics with dN/dS ratios

bioinformatics more details view paper
  • Downloaded 625 times
  • Download rankings, all-time:
    • Site-wide: 16,944 out of 71,037
    • In bioinformatics: 2,597 out of 6,943
  • Year to date:
    • Site-wide: 8,659 out of 71,037
  • Since beginning of last month:
    • Site-wide: 13,445 out of 71,037

Origins of cell-to-cell variability, kinetic proof-reading and the robustness of MAPK signal transduction

systems biology more details view paper
  • Downloaded 575 times
  • Download rankings, all-time:
    • Site-wide: 19,071 out of 71,037
    • In systems biology: 566 out of 1,954
  • Year to date:
    • Site-wide: 52,758 out of 71,037
  • Since beginning of last month:
    • Site-wide: 63,987 out of 71,037

Two new plasmid post-segregational killing mechanisms for the implementation of synthetic gene networks in E. coli

synthetic biology more details view paper
  • Downloaded 480 times
  • Download rankings, all-time:
    • Site-wide: 24,044 out of 71,037
    • In synthetic biology: 377 out of 675
  • Year to date:
    • Site-wide: 62,140 out of 71,037
  • Since beginning of last month:
    • Site-wide: 22,128 out of 71,037

A Bayesian framework for the analysis of systems biology models of the brain

systems biology more details view paper
  • Downloaded 432 times
  • Download rankings, all-time:
    • Site-wide: 27,147 out of 71,037
    • In systems biology: 817 out of 1,954
  • Year to date:
    • Site-wide: 26,428 out of 71,037
  • Since beginning of last month:
    • Site-wide: 14,027 out of 71,037

Detecting changes in the Caenorhabditis elegans intestinal environment using an engineered bacterial biosensor

synthetic biology more details view paper
  • Downloaded 333 times
  • Download rankings, all-time:
    • Site-wide: 35,759 out of 71,037
    • In synthetic biology: 502 out of 675
  • Year to date:
    • Site-wide: 28,820 out of 71,037
  • Since beginning of last month:
    • Site-wide: 26,671 out of 71,037

Killing in response to competition stabilises synthetic microbial consortia

synthetic biology more details view paper
  • Downloaded 236 times
  • Download rankings, all-time:
    • Site-wide: 46,974 out of 71,037
    • In synthetic biology: 592 out of 675
  • Year to date:
    • Site-wide: 1,828 out of 71,037
  • Since beginning of last month:
    • Site-wide: 1,080 out of 71,037

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