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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 62,963 bioRxiv papers from 279,321 authors.

Author: Hongkui Zeng

Rankings

  • All-time downloads: 69,211 (rank: 166 out of 279,321)
  • Categories:
    • bioinformatics: 1,331 (rank: 5,776 (tie) out of 24,444)
    • developmental biology: 338 (rank: 5,220 (tie) out of 10,357)
    • molecular biology: 119 (rank: 11,225 (tie) out of 12,753)
    • neuroscience: 67,423 (rank: 10 out of 46,143)

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Preprints

A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas

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On the correspondence of electrical and optical physiology in in vivo population-scale two-photon calcium imaging.

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A suite of transgenic driver and reporter mouse lines with enhanced brain cell type targeting and functionality

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  • Downloaded 9,695 times
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    • Site-wide: 113 out of 62,963
    • In neuroscience: 16 out of 11,208
  • Year to date:
    • Site-wide: 245 out of 62,963
  • Since beginning of last month:
    • Site-wide: 393 out of 62,963

Shared and distinct transcriptomic cell types across neocortical areas

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  • Downloaded 6,226 times
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    • Site-wide: 267 out of 62,963
    • In neuroscience: 40 out of 11,208
  • Year to date:
    • Site-wide: 1,700 out of 62,963
  • Since beginning of last month:
    • Site-wide: 3,868 out of 62,963

Prospective, brain-wide labeling of neuronal subclasses with enhancer-driven AAVs

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  • Downloaded 5,993 times
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    • Site-wide: 295 out of 62,963
    • In neuroscience: 43 out of 11,208
  • Year to date:
    • Site-wide: 56 out of 62,963
  • Since beginning of last month:
    • Site-wide: 1,021 out of 62,963

The organization of intracortical connections by layer and cell class in the mouse brain

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  • Downloaded 5,050 times
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    • Site-wide: 394 out of 62,963
    • In neuroscience: 52 out of 11,208
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    • Site-wide: 536 out of 62,963
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    • Site-wide: 502 out of 62,963

Distinct descending motor cortex pathways and their roles in movement

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  • Downloaded 4,539 times
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    • Site-wide: 485 out of 62,963
    • In neuroscience: 59 out of 11,208
  • Year to date:
    • Site-wide: 5,337 out of 62,963
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    • Site-wide: 10,454 out of 62,963

Conserved cell types with divergent features between human and mouse cortex

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  • Downloaded 4,359 times
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    • Site-wide: 530 out of 62,963
    • In neuroscience: 67 out of 11,208
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    • Site-wide: 752 out of 62,963

A large-scale, standardized physiological survey reveals higher order coding throughout the mouse visual cortex

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  • Downloaded 4,124 times
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    • In neuroscience: 73 out of 11,208
  • Year to date:
    • Site-wide: 724 out of 62,963
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    • Site-wide: 1,031 out of 62,963

All-optical electrophysiology reveals brain-state dependent changes in hippocampal subthreshold dynamics and excitability

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  • Downloaded 4,076 times
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    • Site-wide: 606 out of 62,963
    • In neuroscience: 75 out of 11,208
  • Year to date:
    • Site-wide: 3,153 out of 62,963
  • Since beginning of last month:
    • Site-wide: 9,115 out of 62,963

Classification of electrophysiological and morphological types in mouse visual cortex

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  • Downloaded 3,663 times
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    • Site-wide: 753 out of 62,963
    • In neuroscience: 98 out of 11,208
  • Year to date:
    • Site-wide: 531 out of 62,963
  • Since beginning of last month:
    • Site-wide: 2,194 out of 62,963

Equivalent high-resolution identification of neuronal cell types with single-nucleus and single-cell RNA-sequencing

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  • Downloaded 3,192 times
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    • Site-wide: 959 out of 62,963
    • In neuroscience: 129 out of 11,208
  • Year to date:
    • Site-wide: 2,278 out of 62,963
  • Since beginning of last month:
    • Site-wide: 8,006 out of 62,963

Single-Cell Transcriptomic Evidence for Dense Intracortical Neuropeptide Networks

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  • Downloaded 2,003 times
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    • In neuroscience: 325 out of 11,208
  • Year to date:
    • Site-wide: 400 out of 62,963
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    • Site-wide: 4,505 out of 62,963

Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex

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    • In neuroscience: 414 out of 11,208
  • Year to date:
    • Site-wide: 22,548 out of 62,963
  • Since beginning of last month:
    • Site-wide: 23,293 out of 62,963

Complete single neuron reconstruction reveals morphological diversity in molecularly defined claustral and cortical neuron types

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  • Downloaded 1,618 times
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    • In neuroscience: 493 out of 11,208
  • Year to date:
    • Site-wide: 603 out of 62,963
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    • Site-wide: 763 out of 62,963

RecV recombinase system for in vivo targeted optogenomic modifications of single cells or cell populations

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  • Downloaded 1,512 times
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    • In neuroscience: 559 out of 11,208
  • Year to date:
    • Site-wide: 696 out of 62,963
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    • Site-wide: 2,980 out of 62,963

Epigenetic landscape and AAV targeting of human neocortical cell classes

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  • Downloaded 1,463 times
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    • Site-wide: 3,800 out of 62,963
    • In neuroscience: 592 out of 11,208
  • Year to date:
    • Site-wide: 741 out of 62,963
  • Since beginning of last month:
    • Site-wide: 2,642 out of 62,963

Parallel holographic illumination enables sub-millisecond two-photon optogenetic activation in mouse visual cortex in vivo

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  • Downloaded 1,429 times
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    • In neuroscience: 616 out of 11,208
  • Year to date:
    • Site-wide: 5,261 out of 62,963
  • Since beginning of last month:
    • Site-wide: 9,009 out of 62,963

Multimodal cell type correspondence by intersectional mFISH in intact tissues

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  • Downloaded 1,245 times
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    • Site-wide: 4,940 out of 62,963
    • In neuroscience: 767 out of 11,208
  • Year to date:
    • Site-wide: 1,005 out of 62,963
  • Since beginning of last month:
    • Site-wide: 5,632 out of 62,963

High resolution data-driven model of the mouse connectome

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  • Downloaded 1,158 times
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    • Site-wide: 5,576 out of 62,963
    • In neuroscience: 873 out of 11,208
  • Year to date:
    • Site-wide: 13,386 out of 62,963
  • Since beginning of last month:
    • Site-wide: 14,575 out of 62,963

Connectional architecture of a mouse hypothalamic circuit node controlling social behavior

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  • Downloaded 989 times
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    • Site-wide: 7,228 out of 62,963
    • In neuroscience: 1,118 out of 11,208
  • Year to date:
    • Site-wide: 7,922 out of 62,963
  • Since beginning of last month:
    • Site-wide: 28,456 out of 62,963

The Markov link method: a nonparametric approach to combine observations from multiple experiments

bioinformatics more details view paper
  • Downloaded 870 times
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    • Site-wide: 8,859 out of 62,963
    • In bioinformatics: 1,549 out of 6,253
  • Year to date:
    • Site-wide: 4,780 out of 62,963
  • Since beginning of last month:
    • Site-wide: 16,581 out of 62,963

Flexible Learning-Free Segmentation and Reconstruction for Sparse Neuronal Circuit Tracing

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  • Downloaded 802 times
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    • Site-wide: 10,022 out of 62,963
    • In neuroscience: 1,576 out of 11,208
  • Year to date:
    • Site-wide: 13,278 out of 62,963
  • Since beginning of last month:
    • Site-wide: 20,788 out of 62,963

Relationship between spiking activity and simultaneously recorded fluorescence signals in transgenic mice expressing GCaMP6

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  • Downloaded 688 times
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    • Site-wide: 12,529 out of 62,963
    • In neuroscience: 2,010 out of 11,208
  • Year to date:
    • Site-wide: 2,843 out of 62,963
  • Since beginning of last month:
    • Site-wide: 98 out of 62,963

The claustrum is required for reward acquisition under high cognitive demand

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  • Downloaded 582 times
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    • Site-wide: 15,790 out of 62,963
    • In neuroscience: 2,603 out of 11,208
  • Year to date:
    • Site-wide: 26,239 out of 62,963
  • Since beginning of last month:
    • Site-wide: 35,628 out of 62,963

Activation of neuromodulatory axon projections in primary visual cortex during periods of locomotion and pupil dilation

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  • Downloaded 503 times
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    • Site-wide: 19,081 out of 62,963
    • In neuroscience: 3,187 out of 11,208
  • Year to date:
    • Site-wide: 7,100 out of 62,963
  • Since beginning of last month:
    • Site-wide: 7,359 out of 62,963

SmartScope2: Simultaneous Imaging and Reconstruction of Neuronal Morphology

bioinformatics more details view paper
  • Downloaded 461 times
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    • Site-wide: 21,174 out of 62,963
    • In bioinformatics: 3,082 out of 6,253
  • Year to date:
    • Site-wide: 51,716 out of 62,963
  • Since beginning of last month:
    • Site-wide: 49,796 out of 62,963

TeraVR Empowers Precise Reconstruction of Complete 3-D Neuronal Morphology in the Whole Brain

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  • Downloaded 407 times
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    • Site-wide: 24,424 out of 62,963
    • In neuroscience: 4,115 out of 11,208
  • Year to date:
    • Site-wide: 6,919 out of 62,963
  • Since beginning of last month:
    • Site-wide: 28,461 out of 62,963

Local processing of visual information in neurites of VGluT3-expressing amacrine cells

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  • Downloaded 345 times
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    • Site-wide: 28,979 out of 62,963
    • In neuroscience: 4,928 out of 11,208
  • Year to date:
    • Site-wide: 58,316 out of 62,963
  • Since beginning of last month:
    • Site-wide: 59,097 out of 62,963

Cell-nonautonomous local and systemic responses to cell arrest enable long-bone catch-up growth

developmental biology more details view paper
  • Downloaded 338 times
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    • Site-wide: 29,515 out of 62,963
    • In developmental biology: 834 out of 1,872
  • Year to date:
    • Site-wide: 58,836 out of 62,963
  • Since beginning of last month:
    • Site-wide: 57,712 out of 62,963

A bestiary of genetic mouse lines and related tools for inducible and reversible intersectional misexpression

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  • Downloaded 119 times
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    • Site-wide: 54,851 out of 62,963
    • In molecular biology: 1,657 out of 1,967
  • Year to date:
    • Site-wide: 35,146 out of 62,963
  • Since beginning of last month:
    • Site-wide: 2,663 out of 62,963

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