Author: Hongkui Zeng

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Preprints

A suite of transgenic driver and reporter mouse lines with enhanced brain cell type targeting and functionality

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  • Site-wide: 606
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  • Site-wide: 7,620
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  • Site-wide: 7,620

Enhancer viruses and a transgenic platform for combinatorial cell subclass-specific labeling

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  • Site-wide: 830
  • In neuroscience: 38
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  • Site-wide: None
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Shared and distinct transcriptomic cell types across neocortical areas

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  • Site-wide: 1,174
  • In neuroscience: 53
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  • Site-wide: 19,953
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  • Site-wide: 19,953

The organization of intracortical connections by layer and cell class in the mouse brain

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  • Site-wide: 1,265
  • In neuroscience: 61
• Year to date:
  • Site-wide: 9,981
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  • Site-wide: 9,981

Conserved cell types with divergent features between human and mouse cortex

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  • Site-wide: 1,506
  • In neuroscience: 78
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  • Site-wide: 9,302
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A large-scale, standardized physiological survey reveals higher order coding throughout the mouse visual cortex

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  • Site-wide: 1,603
  • In neuroscience: 83
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  • Site-wide: 15,524
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  • Site-wide: 15,524

A taxonomy of transcriptomic cell types across the isocortex and hippocampal formation

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  • Site-wide: 1,771
  • In neuroscience: 94
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  • Site-wide: 1,341
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Brain-wide single neuron reconstruction reveals morphological diversity in molecularly defined striatal, thalamic, cortical and claustral neuron types

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  • Site-wide: 1,777
  • In neuroscience: 95
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  • Site-wide: 2,316
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Distinct descending motor cortex pathways and their roles in movement

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  • Site-wide: 1,864
  • In neuroscience: 104
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  • Site-wide: 40,947
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  • Site-wide: 40,947

An integrated transcriptomic and epigenomic atlas of mouse primary motor cortex cell types

• Downloaded 4,808 times
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  • Site-wide: 1,942
  • In neuroscience: 112
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  • Site-wide: 1,179
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  • Site-wide: 1,179

Classification of electrophysiological and morphological types in mouse visual cortex

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  • Site-wide: 2,034
  • In neuroscience: 122
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  • Site-wide: 21,123
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  • Site-wide: 21,123

Toward an integrated classification of neuronal cell types: morphoelectric and transcriptomic characterization of individual GABAergic cortical neurons

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  • Site-wide: 2,057
  • In neuroscience: 125
• Year to date:
  • Site-wide: 8,097
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  • Site-wide: 8,097

All-optical electrophysiology reveals brain-state dependent changes in hippocampal subthreshold dynamics and excitability

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  • Site-wide: 2,143
  • In neuroscience: 132
• Year to date:
  • Site-wide: 39,626
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  • Site-wide: 39,626

Evolution of cellular diversity in primary motor cortex of human, marmoset monkey, and mouse

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  • Site-wide: 2,382
  • In neuroscience: 161
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  • Site-wide: 2,093
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Functional enhancer elements drive subclass-selective expression from mouse to primate neocortex

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  • Site-wide: 2,464
  • In neuroscience: 168
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  • Site-wide: 4,620
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  • Site-wide: 4,620

A survey of spiking activity reveals a functional hierarchy of mouse corticothalamic visual areas

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  • Site-wide: 2,481
  • In neuroscience: 169
• Year to date:
  • Site-wide: 2,007
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Equivalent high-resolution identification of neuronal cell types with single-nucleus and single-cell RNA-sequencing

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  • Site-wide: 2,776
  • In neuroscience: 207
• Year to date:
  • Site-wide: 31,198
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  • Site-wide: 31,198

Phenotypic variation within and across transcriptomic cell types in mouse motor cortex

• Downloaded 3,573 times
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  • Site-wide: 2,985
  • In neuroscience: 229
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  • Site-wide: 18,630
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  • Site-wide: 18,630

A multimodal cell census and atlas of the mammalian primary motor cortex

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  • Site-wide: 3,410
  • In neuroscience: 278
• Year to date:
  • Site-wide: 1,235
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  • Site-wide: 1,235

Aberrant Cortical Activity In Multiple GCaMP6-Expressing Transgenic Mouse Lines

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  • Site-wide: 3,652
  • In neuroscience: 299
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  • Site-wide: 77,455
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  • Site-wide: 77,455

Relationship between simultaneously recorded spiking activity and fluorescence signal in GCaMP6 transgenic mice

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  • Site-wide: 4,167
  • In neuroscience: 368
• Year to date:
  • Site-wide: 6,242
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  • Site-wide: 6,242

Single-Cell Transcriptomic Evidence for Dense Intracortical Neuropeptide Networks

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  • Site-wide: 4,352
  • In neuroscience: 393
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  • Site-wide: 47,230
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  • Site-wide: 47,230

RecV recombinase system for in vivo targeted optogenomic modifications of single cells or cell populations

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  • Site-wide: 5,251
  • In neuroscience: 498
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Molecular, spatial and projection diversity of neurons in primary motor cortex revealed by in situ single-cell transcriptomics

• Downloaded 2,150 times
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  • Site-wide: 6,211
  • In neuroscience: 615
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Sparse recurrent excitatory connectivity in the microcircuit of the adult mouse and human cortex

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  • Site-wide: 6,825
  • In neuroscience: 693
• Year to date:
  • Site-wide: 41,561
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  • Site-wide: 41,561

Parallel holographic illumination enables sub-millisecond two-photon optogenetic activation in mouse visual cortex in vivo

• Downloaded 1,875 times
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  • Site-wide: 7,576
  • In neuroscience: 796
• Year to date:
  • Site-wide: 57,468
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  • Site-wide: 57,468

Cellular Anatomy of the Mouse Primary Motor Cortex

• Downloaded 1,798 times
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  • Site-wide: 8,081
  • In neuroscience: 849
• Year to date:
  • Site-wide: 4,144
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  • Site-wide: 4,144

Isoform cell type specificity in the mouse primary motor cortex

• Downloaded 1,797 times
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  • Site-wide: 8,085
  • In neuroscience: 850
• Year to date:
  • Site-wide: 13,543
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  • Site-wide: 13,543

Multimodal cell type correspondence by intersectional mFISH in intact tissues

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  • Site-wide: 8,658
  • In neuroscience: 923
• Year to date:
  • Site-wide: 22,547
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  • Site-wide: 22,547

Human cortical expansion involves diversification and specialization of supragranular intratelencephalic-projecting neurons

• Downloaded 1,620 times
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  • Site-wide: 9,496
  • In neuroscience: 1,035
• Year to date:
  • Site-wide: 6,540
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  • Site-wide: 6,540

High resolution data-driven model of the mouse connectome

• Downloaded 1,461 times
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  • Site-wide: 11,010
  • In neuroscience: 1,247
• Year to date:
  • Site-wide: 65,904
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  • Site-wide: 65,904

Regional, layer, and cell-class specific connectivity of the mouse default mode network

• Downloaded 1,399 times
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  • Site-wide: 11,773
  • In neuroscience: 1,362
• Year to date:
  • Site-wide: 10,477
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  • Site-wide: 10,477

On the correspondence of electrical and optical physiology in in vivo population-scale two-photon calcium imaging.

• Downloaded 1,252 times
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  • Site-wide: 13,897
  • In neuroscience: 1,672
• Year to date:
  • Site-wide: 21,443
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  • Site-wide: 21,443

Connectional architecture of a mouse hypothalamic circuit node controlling social behavior

• Downloaded 1,238 times
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  • Site-wide: 14,138
  • In neuroscience: 1,715
• Year to date:
  • Site-wide: 96,641
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  • Site-wide: 96,641

The Markov link method: a nonparametric approach to combine observations from multiple experiments

• Downloaded 1,160 times
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  • Site-wide: 15,599
  • In bioinformatics: 1,916
• Year to date:
  • Site-wide: 44,523
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  • Site-wide: 44,523

Activation of neuromodulatory axon projections in primary visual cortex during periods of locomotion and pupil dilation

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  • Site-wide: 15,722
  • In neuroscience: 1,952
• Year to date:
  • Site-wide: 9,468
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  • Site-wide: 9,468

Flexible Learning-Free Segmentation and Reconstruction for Sparse Neuronal Circuit Tracing

• Downloaded 1,107 times
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  • Site-wide: 16,762
  • In neuroscience: 2,112
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  • Site-wide: 72,585
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  • Site-wide: 72,585

Single-cell regulatory landscape and disease vulnerability map of adult Macaque cortex

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  • Site-wide: 20,978
  • In neuroscience: 2,711
• Year to date:
  • Site-wide: 10,096
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  • Site-wide: 10,096

The claustrum is required for reward acquisition under high cognitive demand

• Downloaded 797 times
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  • Site-wide: 26,872
  • In neuroscience: 3,634
• Year to date:
  • Site-wide: 85,327
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  • Site-wide: 85,327

Distribution and strength of interlaminar synaptic connectivity in mouse primary visual cortex revealed by two-photon optogenetic stimulation

• Downloaded 744 times
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  • Site-wide: 29,577
  • In neuroscience: 4,073
• Year to date:
  • Site-wide: 74,557
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  • Site-wide: 74,557

The spatial structure of feedforward information in mouse primary visual cortex

• Downloaded 731 times
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  • Site-wide: 30,310
  • In neuroscience: 4,177
• Year to date:
  • Site-wide: 32,119
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  • Site-wide: 32,119

Scaled, high fidelity electrophysiological, morphological, and transcriptomic cell characterization

• Downloaded 712 times
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  • Site-wide: 31,503
  • In neuroscience: 4,363
• Year to date:
  • Site-wide: 7,665
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  • Site-wide: 7,665

TeraVR Empowers Precise Reconstruction of Complete 3-D Neuronal Morphology in the Whole Brain

• Downloaded 612 times
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  • Site-wide: 38,456
  • In neuroscience: 5,507
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  • Site-wide: 90,649
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  • Site-wide: 90,649

Distinct transcriptomic cell types and neural circuits of the subiculum and prosubiculum along the dorsal-ventral axis

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  • Site-wide: 39,094
  • In neuroscience: 5,602
• Year to date:
  • Site-wide: 31,935
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  • Site-wide: 31,935

SmartScope2: Simultaneous Imaging and Reconstruction of Neuronal Morphology

• Downloaded 542 times
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  • Site-wide: 44,731
  • In bioinformatics: 4,750
• Year to date:
  • Site-wide: 119,189
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  • Site-wide: 119,189

Single-cell RNA-seq uncovers shared and distinct axes of variation in dorsal LGN neurons in mice, non-human primates and humans

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  • Site-wide: 47,270
  • In neuroscience: 6,969
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Molecular and genetic approaches for assaying human cell type synaptic connectivity

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  • Site-wide: 48,213
  • In neuroscience: 7,132
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  • Site-wide: 20,717
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  • Site-wide: 20,717

A collection of genetic mouse lines and related tools for inducible and reversible intersectional misexpression

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  • Site-wide: 50,355
  • In molecular biology: 1,441
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  • Site-wide: 50,178
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  • Site-wide: 50,178

Single Cell Enhancer Activity Maps Neuronal Lineages in Embryonic Mouse Basal Ganglia

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  • Site-wide: 50,748
  • In neuroscience: 7,567
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  • Site-wide: 1,137
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  • Site-wide: 1,137

Local processing of visual information in neurites of VGluT3-expressing amacrine cells

• Downloaded 428 times
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  • Site-wide: 58,323
  • In neuroscience: 8,844
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  • Site-wide: 107,226

Consistent cross-modal identification of cortical neurons with coupled autoencoders

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  • Site-wide: 58,643
  • In neuroscience: 8,899
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  • Site-wide: 7,654
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  • Site-wide: 7,654

Cell-nonautonomous local and systemic responses to cell arrest enable long-bone catch-up growth

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  • Site-wide: 59,667
  • In developmental biology: 1,510
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  • Site-wide: 107,468

Transcriptional Network Orchestrating Regional Patterning of Cortical Progenitors

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  • Site-wide: 68,999
  • In neuroscience: 10,578
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  • Site-wide: 22,744
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  • Site-wide: 22,744

Petabyte-Scale Multi-Morphometry of Single Neurons for Whole Brains

• Downloaded 255 times
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  • Site-wide: 89,383
  • In neuroscience: 13,936
• Year to date:
  • Site-wide: 2,768
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  • Site-wide: 2,768

Signature morpho-electric, transcriptomic, and dendritic properties of extratelencephalic-projecting human layer 5 neocortical pyramidal neurons

• Downloaded 240 times
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  • Site-wide: 92,507
  • In neuroscience: 14,472
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  • Site-wide: 15,865
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  • Site-wide: 15,865

Voltage imaging using transgenic mouse lines expressing the GEVI ArcLight in two olfactory cell types

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  • Site-wide: 101,361
  • In neuroscience: 15,845
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  • Site-wide: 43,202