Rxivist logo

Author: Gil McVean

Rankings

  • All-time downloads: 61,870 (rank: 534 out of 362,280)
  • Categories:
    • bioinformatics: 19,623 (rank: 123 out of 31,341)
    • epidemiology: 674 (rank: 2,219 (tie) out of 9,547)
    • evolutionary biology: 4,813 (rank: 369 out of 18,772)
    • genetics: 23,704 (rank: 227 out of 33,972)
    • genomics: 13,056 (rank: 901 out of 39,124)

Downloads per author, site-wide

Preprints

Genome-wide genetic data on ~500,000 UK Biobank participants

genetics more details view paper
  • Downloaded 16,036 times
  • Download rankings, all-time:
    • Site-wide: 98 out of 84,134
    • In genetics: 8 out of 4,420
  • Year to date:
    • Site-wide: 543 out of 84,134
  • Since beginning of last month:
    • Site-wide: 938 out of 84,134

Genome Graphs

bioinformatics more details view paper
  • Downloaded 8,299 times
  • Download rankings, all-time:
    • Site-wide: 299 out of 84,134
    • In bioinformatics: 37 out of 8,060
  • Year to date:
    • Site-wide: 3,207 out of 84,134
  • Since beginning of last month:
    • Site-wide: 4,232 out of 84,134

Real-time search of all bacterial and viral genomic data

bioinformatics more details view paper
  • Downloaded 5,838 times
  • Download rankings, all-time:
    • Site-wide: 521 out of 84,134
    • In bioinformatics: 85 out of 8,060
  • Year to date:
    • Site-wide: 12,053 out of 84,134
  • Since beginning of last month:
    • Site-wide: 12,785 out of 84,134

Genome variation and meiotic recombination in Plasmodium falciparum: insights from deep sequencing of genetic crosses

genomics more details view paper
  • Downloaded 3,545 times
  • Download rankings, all-time:
    • Site-wide: 1,273 out of 84,134
    • In genomics: 283 out of 5,430
  • Year to date:
    • Site-wide: 43,482 out of 84,134
  • Since beginning of last month:
    • Site-wide: 43,636 out of 84,134

Improved genome inference in the MHC using a population reference graph

genomics more details view paper
  • Downloaded 3,299 times
  • Download rankings, all-time:
    • Site-wide: 1,438 out of 84,134
    • In genomics: 304 out of 5,430
  • Year to date:
    • Site-wide: 67,395 out of 84,134
  • Since beginning of last month:
    • Site-wide: 62,565 out of 84,134

Rapid antibiotic resistance predictions from genome sequence data for S. aureus and M. tuberculosis.

genomics more details view paper
  • Downloaded 3,187 times
  • Download rankings, all-time:
    • Site-wide: 1,520 out of 84,134
    • In genomics: 320 out of 5,430
  • Year to date:
    • Site-wide: 71,013 out of 84,134
  • Since beginning of last month:
    • Site-wide: 71,612 out of 84,134

Dating genomic variants and shared ancestry in population-scale sequencing data

genomics more details view paper
  • Downloaded 3,025 times
  • Download rankings, all-time:
    • Site-wide: 1,671 out of 84,134
    • In genomics: 348 out of 5,430
  • Year to date:
    • Site-wide: 7,618 out of 84,134
  • Since beginning of last month:
    • Site-wide: 11,186 out of 84,134

Inferring the ancestry of everyone

evolutionary biology more details view paper
  • Downloaded 2,961 times
  • Download rankings, all-time:
    • Site-wide: 1,746 out of 84,134
    • In evolutionary biology: 65 out of 5,219
  • Year to date:
    • Site-wide: 5,383 out of 84,134
  • Since beginning of last month:
    • Site-wide: 4,265 out of 84,134

A reference dataset of 5.4 million phased human variants validated by genetic inheritance from sequencing a three-generation 17-member pedigree

bioinformatics more details view paper
  • Downloaded 2,755 times
  • Download rankings, all-time:
    • Site-wide: 1,972 out of 84,134
    • In bioinformatics: 360 out of 8,060
  • Year to date:
    • Site-wide: 45,513 out of 84,134
  • Since beginning of last month:
    • Site-wide: 46,716 out of 84,134

Practical Use of Methods for Imputation of HLA Alleles from SNP Genotype Data

genetics more details view paper
  • Downloaded 2,289 times
  • Download rankings, all-time:
    • Site-wide: 2,713 out of 84,134
    • In genetics: 216 out of 4,420
  • Year to date:
    • Site-wide: 6,321 out of 84,134
  • Since beginning of last month:
    • Site-wide: 4,700 out of 84,134

Bayesian analysis of genetic association across tree-structured routine healthcare data in the UK Biobank

genetics more details view paper
  • Downloaded 1,613 times
  • Download rankings, all-time:
    • Site-wide: 4,857 out of 84,134
    • In genetics: 368 out of 4,420
  • Year to date:
    • Site-wide: 44,522 out of 84,134
  • Since beginning of last month:
    • Site-wide: 39,593 out of 84,134

New insights into malaria susceptibility from the genomes of 17,000 individuals from Africa, Asia, and Oceania

genetics more details view paper
  • Downloaded 1,529 times
  • Download rankings, all-time:
    • Site-wide: 5,303 out of 84,134
    • In genetics: 403 out of 4,420
  • Year to date:
    • Site-wide: 19,440 out of 84,134
  • Since beginning of last month:
    • Site-wide: 20,081 out of 84,134

Systematic classification of shared components of genetic risk for common human diseases

genetics more details view paper
  • Downloaded 1,380 times
  • Download rankings, all-time:
    • Site-wide: 6,276 out of 84,134
    • In genetics: 459 out of 4,420
  • Year to date:
    • Site-wide: 19,491 out of 84,134
  • Since beginning of last month:
    • Site-wide: 20,715 out of 84,134

Integrating long-range connectivity information into de Bruijn graphs

bioinformatics more details view paper
  • Downloaded 1,347 times
  • Download rankings, all-time:
    • Site-wide: 6,557 out of 84,134
    • In bioinformatics: 1,178 out of 8,060
  • Year to date:
    • Site-wide: 15,063 out of 84,134
  • Since beginning of last month:
    • Site-wide: 48,564 out of 84,134

Stable recombination hotspots in birds

evolutionary biology more details view paper
  • Downloaded 1,021 times
  • Download rankings, all-time:
    • Site-wide: 10,341 out of 84,134
    • In evolutionary biology: 596 out of 5,219
  • Year to date:
    • Site-wide: 76,600 out of 84,134
  • Since beginning of last month:
    • Site-wide: 78,904 out of 84,134

Deconvolution of multiple infections in Plasmodium falciparum from high throughput sequencing data

bioinformatics more details view paper
  • Downloaded 909 times
  • Download rankings, all-time:
    • Site-wide: 12,443 out of 84,134
    • In bioinformatics: 1,999 out of 8,060
  • Year to date:
    • Site-wide: 35,693 out of 84,134
  • Since beginning of last month:
    • Site-wide: 73,859 out of 84,134

Coupling Wright-Fisher and coalescent dynamics for realistic simulation of population-scale datasets

evolutionary biology more details view paper
  • Downloaded 831 times
  • Download rankings, all-time:
    • Site-wide: 14,273 out of 84,134
    • In evolutionary biology: 882 out of 5,219
  • Year to date:
    • Site-wide: 8,968 out of 84,134
  • Since beginning of last month:
    • Site-wide: 12,401 out of 84,134

The origins and relatedness structure of mixed infections vary with local prevalence of P. falciparum malaria

epidemiology more details view paper
  • Downloaded 674 times
  • Download rankings, all-time:
    • Site-wide: 19,561 out of 84,134
    • In epidemiology: 226 out of 1,556
  • Year to date:
    • Site-wide: 44,216 out of 84,134
  • Since beginning of last month:
    • Site-wide: 51,303 out of 84,134

Mapping the drivers of within-host pathogen evolution using massive data sets

genetics more details view paper
  • Downloaded 567 times
  • Download rankings, all-time:
    • Site-wide: 25,028 out of 84,134
    • In genetics: 1,576 out of 4,420
  • Year to date:
    • Site-wide: 37,590 out of 84,134
  • Since beginning of last month:
    • Site-wide: 39,997 out of 84,134

Detection of simple and complex de novo mutations without, with, or with multiple reference sequences

bioinformatics more details view paper
  • Downloaded 475 times
  • Download rankings, all-time:
    • Site-wide: 31,115 out of 84,134
    • In bioinformatics: 4,048 out of 8,060
  • Year to date:
    • Site-wide: 21,440 out of 84,134
  • Since beginning of last month:
    • Site-wide: 30,622 out of 84,134

Selfish mutations dysregulating RAS-MAPK signaling are pervasive in aged human testes

genetics more details view paper
  • Downloaded 290 times
  • Download rankings, all-time:
    • Site-wide: 51,257 out of 84,134
    • In genetics: 2,936 out of 4,420
  • Year to date:
    • Site-wide: 63,754 out of 84,134
  • Since beginning of last month:
    • Site-wide: 68,805 out of 84,134

PanLingua

Sign up for the Rxivist weekly newsletter! (Click here for more details.)


News