Author: Nir Hacohen
- ORCiD: http://orcid.org/0000-0002-2349-2656
- Most recently observed institution: Broad Institute of MIT and Harvard, Cambridge, MA, USA; Center for Cancer Research, Massachusetts General Hospital, Boston, MA, USA.
Rankings
- All-time downloads: 77,961 (rank: 1,780 (tie) )
- Categories:
- bioengineering: 3,071 (rank: 556 )
- bioinformatics: 2,445 (rank: 5,582 (tie) )
- cancer biology: 5,258 (rank: 517 (tie) )
- cardiovascular medicine: 187 (rank: 2,254 (tie) )
- cell biology: 12,603 (rank: 197 (tie) )
- genetics: 2,546 (rank: 7,172 (tie) )
- genomics: 24,693 (rank: 371 )
- immunology: 19,586 (rank: 417 )
- infectious diseases: 3,385 (rank: 9,731 )
- physiology: 312 (rank: 5,370 (tie) )
- rheumatology: 414 (rank: 551 (tie) )
- systems biology: 3,461 (rank: 1,004 (tie) )
Downloads per author, site-wide
Preprints
Differentiation of exhausted CD8 T cells after termination of chronic antigen stimulation stops short of achieving functional T cell memory
immunology more details view paperNo download data for this paper yet.
Systematic comparative analysis of single cell RNA-sequencing methods
genomics more details view paper- Downloaded 14,069 times
- Download rankings, all-time:
- Site-wide: 488
- In genomics: 29
- Year to date:
- Site-wide: 1,651
- Since beginning of last month:
- Site-wide: 2,198
The Human Cell Atlas
cell biology more details view paper- Downloaded 12,603 times
- Download rankings, all-time:
- Site-wide: 581
- In cell biology: 4
- Year to date:
- Site-wide: 21,175
- Since beginning of last month:
- Site-wide: 17,568
A protocol for single-cell transcriptomics from cryopreserved renal tissue and urine for the Accelerating Medicine Partnership (AMP) RA/SLE network
immunology more details view paper- Downloaded 5,952 times
- Download rankings, all-time:
- Site-wide: 1,551
- In immunology: 36
- Year to date:
- Site-wide: 3,652
- Since beginning of last month:
- Site-wide: 3,885
Defining Inflammatory Cell States in Rheumatoid Arthritis Joint Synovial Tissues by Integrating Single-cell Transcriptomics and Mass Cytometry
immunology more details view paper- Downloaded 4,341 times
- Download rankings, all-time:
- Site-wide: 2,412
- In immunology: 69
- Year to date:
- Site-wide: 25,451
- Since beginning of last month:
- Site-wide: 18,857
Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer
cancer biology more details view paper- Downloaded 3,754 times
- Download rankings, all-time:
- Site-wide: 2,982
- In cancer biology: 43
- Year to date:
- Site-wide: 1,968
- Since beginning of last month:
- Site-wide: 1,656
Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients
systems biology more details view paper- Downloaded 3,461 times
- Download rankings, all-time:
- Site-wide: 3,351
- In systems biology: 50
- Year to date:
- Site-wide: 584
- Since beginning of last month:
- Site-wide: 538
Temporal and Spatial Heterogeneity of Host Response to SARS-CoV-2 Pulmonary Infection
infectious diseases more details view paper- Downloaded 2,889 times
- Download rankings, all-time:
- Site-wide: 4,312
- In infectious diseases: 742
- Year to date:
- Site-wide: 3,480
- Since beginning of last month:
- Site-wide: 3,340
Genome-wide maps of enhancer regulation connect risk variants to disease genes
genetics more details view paper- Downloaded 2,546 times
- Download rankings, all-time:
- Site-wide: 5,185
- In genetics: 237
- Year to date:
- Site-wide: 2,701
- Since beginning of last month:
- Site-wide: 2,771
SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs
immunology more details view paper- Downloaded 2,489 times
- Download rankings, all-time:
- Site-wide: 5,385
- In immunology: 152
- Year to date:
- Site-wide: 2,971
- Since beginning of last month:
- Site-wide: 5,895
A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2
genomics more details view paper- Downloaded 2,440 times
- Download rankings, all-time:
- Site-wide: 5,557
- In genomics: 638
- Year to date:
- Site-wide: 357
- Since beginning of last month:
- Site-wide: 172
Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.
genomics more details view paper- Downloaded 2,177 times
- Download rankings, all-time:
- Site-wide: 6,547
- In genomics: 732
- Year to date:
- Site-wide: 107,560
- Since beginning of last month:
- Site-wide: 98,120
The immune cell landscape in kidneys of lupus nephritis patients
immunology more details view paper- Downloaded 2,141 times
- Download rankings, all-time:
- Site-wide: 6,717
- In immunology: 193
- Year to date:
- Site-wide: 33,609
- Since beginning of last month:
- Site-wide: 31,706
Landscape of X chromosome inactivation across human tissues
genomics more details view paper- Downloaded 2,054 times
- Download rankings, all-time:
- Site-wide: 7,123
- In genomics: 789
- Year to date:
- Site-wide: 73,603
- Since beginning of last month:
- Site-wide: 53,727
Single Cell Transcriptomics And Flow Cytometry Reveal Disease-Associated Fibroblast Subsets In Rheumatoid Arthritis
immunology more details view paper- Downloaded 1,809 times
- Download rankings, all-time:
- Site-wide: 8,634
- In immunology: 251
- Year to date:
- Site-wide: 61,657
- Since beginning of last month:
- Site-wide: 60,480
Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq
bioinformatics more details view paper- Downloaded 1,793 times
- Download rankings, all-time:
- Site-wide: 8,748
- In bioinformatics: 1,062
- Year to date:
- Site-wide: 16,434
- Since beginning of last month:
- Site-wide: 14,521
GeNets: A unified web platform for network-based analyses of genomic data
genomics more details view paper- Downloaded 1,684 times
- Download rankings, all-time:
- Site-wide: 9,625
- In genomics: 1,058
- Year to date:
- Site-wide: 46,366
- Since beginning of last month:
- Site-wide: 97,758
Multicellular immune hubs and their organization in MMRd and MMRp colorectal cancer
cancer biology more details view paper- Downloaded 1,504 times
- Download rankings, all-time:
- Site-wide: 11,307
- In cancer biology: 226
- Year to date:
- Site-wide: 622
- Since beginning of last month:
- Site-wide: 767
An eQTL landscape of kidney tissue in human nephrotic syndrome
genomics more details view paper- Downloaded 1,302 times
- Download rankings, all-time:
- Site-wide: 14,083
- In genomics: 1,493
- Year to date:
- Site-wide: 73,382
- Since beginning of last month:
- Site-wide: 103,353
Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19
immunology more details view paper- Downloaded 1,257 times
- Download rankings, all-time:
- Site-wide: 14,867
- In immunology: 431
- Year to date:
- Site-wide: 8,102
- Since beginning of last month:
- Site-wide: 8,703
Targeting individual cells by barcode in pooled sequence libraries
bioengineering more details view paper- Downloaded 1,194 times
- Download rankings, all-time:
- Site-wide: 16,060
- In bioengineering: 271
- Year to date:
- Site-wide: 127,623
- Since beginning of last month:
- Site-wide: 119,873
High dimensional analyses of cells dissociated from cryopreserved synovial tissue
immunology more details view paper- Downloaded 1,121 times
- Download rankings, all-time:
- Site-wide: 17,656
- In immunology: 510
- Year to date:
- Site-wide: 68,417
- Since beginning of last month:
- Site-wide: 74,881
A cell-free antibody engineering platform rapidly generates SARS-CoV-2 neutralizing antibodies
bioengineering more details view paper- Downloaded 1,087 times
- Download rankings, all-time:
- Site-wide: 18,449
- In bioengineering: 313
- Year to date:
- Site-wide: 7,112
- Since beginning of last month:
- Site-wide: 6,462
Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection
genomics more details view paper- Downloaded 967 times
- Download rankings, all-time:
- Site-wide: 21,854
- In genomics: 2,157
- Year to date:
- Site-wide: 87,001
- Since beginning of last month:
- Site-wide: 103,285
Multiplexed enrichment and genomic profiling of peripheral immune cell subsets on a microfluidic chip
bioengineering more details view paper- Downloaded 790 times
- Download rankings, all-time:
- Site-wide: 29,132
- In bioengineering: 507
- Year to date:
- Site-wide: 125,864
- Since beginning of last month:
- Site-wide: 119,794
MAUDE: Inferring expression changes in sorting-based CRISPR screens
bioinformatics more details view paper- Downloaded 652 times
- Download rankings, all-time:
- Site-wide: 37,869
- In bioinformatics: 4,162
- Year to date:
- Site-wide: 124,024
- Since beginning of last month:
- Site-wide: 121,770
SARS-CoV-2 Viremia is Associated with Distinct Proteomic Pathways and Predicts COVID-19 Outcomes
infectious diseases more details view paper- Downloaded 496 times
- Download rankings, all-time:
- Site-wide: 52,912
- In infectious diseases: 2,709
- Year to date:
- Site-wide: 2,788
- Since beginning of last month:
- Site-wide: 1,551
Integration of urine proteomics and renal single-cell genomics identifies an interferon-gamma response gradient in lupus nephritis.
rheumatology more details view paper- Downloaded 414 times
- Download rankings, all-time:
- Site-wide: 64,294
- In rheumatology: 42
- Year to date:
- Site-wide: 56,903
- Since beginning of last month:
- Site-wide: 39,356
SLAMF6 deficiency augments tumor killing and skews towards an effector phenotype revealing it as a new T cell checkpoint
physiology more details view paper- Downloaded 312 times
- Download rankings, all-time:
- Site-wide: 82,319
- In physiology: 678
- Year to date:
- Site-wide: 89,536
- Since beginning of last month:
- Site-wide: 85,227
Alternative splicing of SLAMF6 in human T cells creates a co-stimulatory isoform that counteracts the inhibitory effect of the full-length receptor
immunology more details view paper- Downloaded 244 times
- Download rankings, all-time:
- Site-wide: 96,784
- In immunology: 2,733
- Year to date:
- Site-wide: 32,551
- Since beginning of last month:
- Site-wide: 29,389
An efficient lentiviral CRISPRi approach to silence genes in primary human monocytes
immunology more details view paper- Downloaded 232 times
- Download rankings, all-time:
- Site-wide: 99,436
- In immunology: 2,814
- Year to date:
- Site-wide: 18,270
- Since beginning of last month:
- Site-wide: 38,809
Application of a 27-protein candidate cardiovascular surrogate endpoint to track risk ascendancy and resolution in COVID-19.
cardiovascular medicine more details view paper- Downloaded 187 times
- Download rankings, all-time:
- Site-wide: 109,368
- In cardiovascular medicine: 235
- Year to date:
- Site-wide: 11,149
- Since beginning of last month:
- Site-wide: 9,666
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News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
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- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
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