Author: Nir Hacohen
- ORCiD: http://orcid.org/0000-0002-2349-2656
- Most recently observed institution: Massachusetts General Hospital
Rankings
- All-time downloads: 64,317 (rank: 1,858 out of 510,799)
- Categories:
- bioengineering: 2,662 (rank: 542 out of 13,764)
- bioinformatics: 2,208 (rank: 5,630 (tie) out of 36,842)
- cancer biology: 2,908 (rank: 1,224 (tie) out of 31,491)
- cell biology: 12,435 (rank: 184 (tie) out of 33,919)
- genetics: 1,852 (rank: 8,799 (tie) out of 38,674)
- genomics: 20,949 (rank: 456 out of 45,521)
- immunology: 17,140 (rank: 248 out of 27,749)
- infectious diseases: 2,176 (rank: 9,896 (tie) out of 32,278)
- physiology: 277 (rank: 5,005 (tie) out of 9,992)
- rheumatology: 361 (rank: 467 (tie) out of 712)
- systems biology: 1,349 (rank: 2,614 (tie) out of 12,795)
Downloads per author, site-wide
Preprints
Systematic comparative analysis of single cell RNA-sequencing methods
genomics more details view paper- Downloaded 12,984 times
- Download rankings, all-time:
- Site-wide: 437 out of 118,417
- In genomics: 31 out of 6,435
- Year to date:
- Site-wide: 1,058 out of 118,417
- Since beginning of last month:
- Site-wide: 1,487 out of 118,417
The Human Cell Atlas
cell biology more details view paper- Downloaded 12,435 times
- Download rankings, all-time:
- Site-wide: 467 out of 118,417
- In cell biology: 4 out of 5,429
- Year to date:
- Site-wide: 10,967 out of 118,417
- Since beginning of last month:
- Site-wide: 13,726 out of 118,417
A protocol for single-cell transcriptomics from cryopreserved renal tissue and urine for the Accelerating Medicine Partnership (AMP) RA/SLE network
immunology more details view paper- Downloaded 5,394 times
- Download rankings, all-time:
- Site-wide: 1,437 out of 118,417
- In immunology: 27 out of 3,302
- Year to date:
- Site-wide: 3,797 out of 118,417
- Since beginning of last month:
- Site-wide: 5,543 out of 118,417
Defining Inflammatory Cell States in Rheumatoid Arthritis Joint Synovial Tissues by Integrating Single-cell Transcriptomics and Mass Cytometry
immunology more details view paper- Downloaded 4,203 times
- Download rankings, all-time:
- Site-wide: 2,053 out of 118,417
- In immunology: 48 out of 3,302
- Year to date:
- Site-wide: 13,306 out of 118,417
- Since beginning of last month:
- Site-wide: 22,029 out of 118,417
Thousands of novel unannotated proteins expand the MHC I immunopeptidome in cancer
cancer biology more details view paper- Downloaded 2,908 times
- Download rankings, all-time:
- Site-wide: 3,482 out of 118,417
- In cancer biology: 57 out of 3,748
- Year to date:
- Site-wide: 1,726 out of 118,417
- Since beginning of last month:
- Site-wide: 2,934 out of 118,417
Temporal and Spatial Heterogeneity of Host Response to SARS-CoV-2 Pulmonary Infection
infectious diseases more details view paper- Downloaded 2,176 times
- Download rankings, all-time:
- Site-wide: 5,326 out of 118,417
- In infectious diseases: 725 out of 3,587
- Year to date:
- Site-wide: 2,405 out of 118,417
- Since beginning of last month:
- Site-wide: 933 out of 118,417
Shared activity patterns arising at genetic susceptibility loci reveal underlying genomic and cellular architecture of human disease.
genomics more details view paper- Downloaded 2,144 times
- Download rankings, all-time:
- Site-wide: 5,458 out of 118,417
- In genomics: 674 out of 6,435
- Year to date:
- Site-wide: 56,805 out of 118,417
- Since beginning of last month:
- Site-wide: 72,716 out of 118,417
The immune cell landscape in kidneys of lupus nephritis patients
immunology more details view paper- Downloaded 2,031 times
- Download rankings, all-time:
- Site-wide: 5,891 out of 118,417
- In immunology: 140 out of 3,302
- Year to date:
- Site-wide: 20,477 out of 118,417
- Since beginning of last month:
- Site-wide: 45,734 out of 118,417
Landscape of X chromosome inactivation across human tissues
genomics more details view paper- Downloaded 2,014 times
- Download rankings, all-time:
- Site-wide: 5,976 out of 118,417
- In genomics: 729 out of 6,435
- Year to date:
- Site-wide: 58,597 out of 118,417
- Since beginning of last month:
- Site-wide: 41,232 out of 118,417
Genome-wide maps of enhancer regulation connect risk variants to disease genes
genetics more details view paper- Downloaded 1,852 times
- Download rankings, all-time:
- Site-wide: 6,785 out of 118,417
- In genetics: 348 out of 5,139
- Year to date:
- Site-wide: 2,926 out of 118,417
- Since beginning of last month:
- Site-wide: 844 out of 118,417
Single Cell Transcriptomics And Flow Cytometry Reveal Disease-Associated Fibroblast Subsets In Rheumatoid Arthritis
immunology more details view paper- Downloaded 1,760 times
- Download rankings, all-time:
- Site-wide: 7,285 out of 118,417
- In immunology: 178 out of 3,302
- Year to date:
- Site-wide: 73,613 out of 118,417
- Since beginning of last month:
- Site-wide: 100,318 out of 118,417
SARS-CoV-2 infected cells present HLA-I peptides from canonical and out-of-frame ORFs
immunology more details view paper- Downloaded 1,659 times
- Download rankings, all-time:
- Site-wide: 7,989 out of 118,417
- In immunology: 195 out of 3,302
- Year to date:
- Site-wide: 3,318 out of 118,417
- Since beginning of last month:
- Site-wide: 315 out of 118,417
GeNets: A unified web platform for network-based analyses of genomic data
genomics more details view paper- Downloaded 1,619 times
- Download rankings, all-time:
- Site-wide: 8,296 out of 118,417
- In genomics: 987 out of 6,435
- Year to date:
- Site-wide: 76,891 out of 118,417
- Since beginning of last month:
- Site-wide: 81,969 out of 118,417
Cumulus: a cloud-based data analysis framework for large-scale single-cell and single-nucleus RNA-seq
bioinformatics more details view paper- Downloaded 1,573 times
- Download rankings, all-time:
- Site-wide: 8,643 out of 118,417
- In bioinformatics: 1,120 out of 9,583
- Year to date:
- Site-wide: 6,105 out of 118,417
- Since beginning of last month:
- Site-wide: 21,551 out of 118,417
Plasma proteomics reveals tissue-specific cell death and mediators of cell-cell interactions in severe COVID-19 patients
systems biology more details view paper- Downloaded 1,349 times
- Download rankings, all-time:
- Site-wide: 10,910 out of 118,417
- In systems biology: 224 out of 2,636
- Year to date:
- Site-wide: 4,244 out of 118,417
- Since beginning of last month:
- Site-wide: 396 out of 118,417
An eQTL landscape of kidney tissue in human nephrotic syndrome
genomics more details view paper- Downloaded 1,258 times
- Download rankings, all-time:
- Site-wide: 12,121 out of 118,417
- In genomics: 1,383 out of 6,435
- Year to date:
- Site-wide: 46,251 out of 118,417
- Since beginning of last month:
- Site-wide: 39,163 out of 118,417
Targeting individual cells by barcode in pooled sequence libraries
bioengineering more details view paper- Downloaded 1,183 times
- Download rankings, all-time:
- Site-wide: 13,300 out of 118,417
- In bioengineering: 216 out of 2,448
- Year to date:
- Site-wide: 114,009 out of 118,417
- Since beginning of last month:
- Site-wide: 111,278 out of 118,417
High dimensional analyses of cells dissociated from cryopreserved synovial tissue
immunology more details view paper- Downloaded 1,074 times
- Download rankings, all-time:
- Site-wide: 15,331 out of 118,417
- In immunology: 389 out of 3,302
- Year to date:
- Site-wide: 43,533 out of 118,417
- Since beginning of last month:
- Site-wide: 41,257 out of 118,417
Genetic analysis of isoform usage in the human anti-viral response reveals influenza-specific regulation of ERAP2 transcripts under balancing selection
genomics more details view paper- Downloaded 930 times
- Download rankings, all-time:
- Site-wide: 18,982 out of 118,417
- In genomics: 2,003 out of 6,435
- Year to date:
- Site-wide: 68,868 out of 118,417
- Since beginning of last month:
- Site-wide: 75,294 out of 118,417
Induction of a regulatory myeloid program in bacterial sepsis and severe COVID-19
immunology more details view paper- Downloaded 866 times
- Download rankings, all-time:
- Site-wide: 21,052 out of 118,417
- In immunology: 538 out of 3,302
- Year to date:
- Site-wide: 7,106 out of 118,417
- Since beginning of last month:
- Site-wide: 1,980 out of 118,417
Multiplexed enrichment and genomic profiling of peripheral immune cell subsets on a microfluidic chip
bioengineering more details view paper- Downloaded 773 times
- Download rankings, all-time:
- Site-wide: 24,725 out of 118,417
- In bioengineering: 415 out of 2,448
- Year to date:
- Site-wide: 74,454 out of 118,417
- Since beginning of last month:
- Site-wide: 73,525 out of 118,417
A cell-free antibody engineering platform rapidly generates SARS-CoV-2 neutralizing antibodies
bioengineering more details view paper- Downloaded 706 times
- Download rankings, all-time:
- Site-wide: 28,067 out of 118,417
- In bioengineering: 479 out of 2,448
- Year to date:
- Site-wide: 9,126 out of 118,417
- Since beginning of last month:
- Site-wide: 889 out of 118,417
MAUDE: Inferring expression changes in sorting-based CRISPR screens
bioinformatics more details view paper- Downloaded 635 times
- Download rankings, all-time:
- Site-wide: 32,333 out of 118,417
- In bioinformatics: 3,739 out of 9,583
- Year to date:
- Site-wide: 29,584 out of 118,417
- Since beginning of last month:
- Site-wide: 94,750 out of 118,417
Integration of urine proteomics and renal single-cell genomics identifies an interferon-gamma response gradient in lupus nephritis.
rheumatology more details view paper- Downloaded 361 times
- Download rankings, all-time:
- Site-wide: 61,038 out of 118,417
- In rheumatology: 31 out of 69
- Year to date:
- Site-wide: 21,090 out of 118,417
- Since beginning of last month:
- Site-wide: 60,240 out of 118,417
SLAMF6 deficiency augments tumor killing and skews towards an effector phenotype revealing it as a new T cell checkpoint
physiology more details view paper- Downloaded 277 times
- Download rankings, all-time:
- Site-wide: 75,549 out of 118,417
- In physiology: 654 out of 1,497
- Year to date:
- Site-wide: 53,147 out of 118,417
- Since beginning of last month:
- Site-wide: 62,581 out of 118,417
Alternative splicing of SLAMF6 in human T cells creates a co-stimulatory isoform that counteracts the inhibitory effect of the full-length receptor
immunology more details view paper- Downloaded 153 times
- Download rankings, all-time:
- Site-wide: 100,012 out of 118,417
- In immunology: 2,703 out of 3,302
- Year to date:
- Site-wide: 56,664 out of 118,417
- Since beginning of last month:
- Site-wide: 32,912 out of 118,417
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News
- 27 Nov 2020: The website and API now include results pulled from medRxiv as well as bioRxiv.
- 18 Dec 2019: We're pleased to announce PanLingua, a new tool that enables you to search for machine-translated bioRxiv preprints using more than 100 different languages.
- 21 May 2019: PLOS Biology has published a community page about Rxivist.org and its design.
- 10 May 2019: The paper analyzing the Rxivist dataset has been published at eLife.
- 1 Mar 2019: We now have summary statistics about bioRxiv downloads and submissions.
- 8 Feb 2019: Data from Altmetric is now available on the Rxivist details page for every preprint. Look for the "donut" under the download metrics.
- 30 Jan 2019: preLights has featured the Rxivist preprint and written about our findings.
- 22 Jan 2019: Nature just published an article about Rxivist and our data.
- 13 Jan 2019: The Rxivist preprint is live!