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Rxivist combines preprints from bioRxiv with data from Twitter to help you find the papers being discussed in your field. Currently indexing 65,353 bioRxiv papers from 289,502 authors.

Author: Erez Lieberman Aiden

  • ORCiD: http://orcid.org/0000-0003-0634-6486
  • Most recently observed institution: Center for Genome Architecture, Department of Molecular and Human Genetics, Baylor College of Medicine, Houston, Texas, United States of America; Center for Theoretical Biological Physics, Rice University, Houston, Texas, United States of America; Broad I

Rankings

  • All-time downloads: 36,473 (rank: 435 out of 289,502)
  • Categories:
    • bioinformatics: 610 (rank: 12,112 (tie) out of 25,220)
    • biophysics: 694 (rank: 2,762 (tie) out of 11,319)
    • cell biology: 1,530 (rank: 1,461 out of 19,346)
    • epidemiology: 109 (rank: 8,729 (tie) out of 9,549)
    • genetics: 10,138 (rank: 904 (tie) out of 28,745)
    • genomics: 21,610 (rank: 298 out of 32,929)
    • molecular biology: 1,782 (rank: 796 (tie) out of 13,667)

Downloads per author, site-wide

Preprints

Activity-by-Contact model of enhancer specificity from thousands of CRISPR perturbations

genetics more details view paper
  • Downloaded 7,312 times
  • Download rankings, all-time:
    • Site-wide: 211 out of 65,353
    • In genetics: 21 out of 3,698
  • Year to date:
    • Site-wide: 47 out of 65,353
  • Since beginning of last month:
    • Site-wide: 143 out of 65,353

Cohesin Loss Eliminates All Loop Domains, Leading To Links Among Superenhancers And Downregulation Of Nearby Genes

genomics more details view paper
  • Downloaded 4,854 times
  • Download rankings, all-time:
    • Site-wide: 447 out of 65,353
    • In genomics: 118 out of 4,462
  • Year to date:
    • Site-wide: 29,199 out of 65,353
  • Since beginning of last month:
    • Site-wide: 29,621 out of 65,353

Genetic determinants of co-accessible chromatin regions in T cell activation across humans

genomics more details view paper
  • Downloaded 4,620 times
  • Download rankings, all-time:
    • Site-wide: 494 out of 65,353
    • In genomics: 128 out of 4,462
  • Year to date:
    • Site-wide: 11,298 out of 65,353
  • Since beginning of last month:
    • Site-wide: 15,281 out of 65,353

The Juicebox Assembly Tools module facilitates de novo assembly of mammalian genomes with chromosome-length scaffolds for under $1000

genomics more details view paper
  • Downloaded 3,766 times
  • Download rankings, all-time:
    • Site-wide: 745 out of 65,353
    • In genomics: 191 out of 4,462
  • Year to date:
    • Site-wide: 1,281 out of 65,353
  • Since beginning of last month:
    • Site-wide: 2,342 out of 65,353

Improved Aedes aegypti mosquito reference genome assembly enables biological discovery and vector control

genomics more details view paper
  • Downloaded 3,109 times
  • Download rankings, all-time:
    • Site-wide: 1,061 out of 65,353
    • In genomics: 255 out of 4,462
  • Year to date:
    • Site-wide: 4,150 out of 65,353
  • Since beginning of last month:
    • Site-wide: 8,213 out of 65,353

Walking along chromosomes with super-resolution imaging, contact maps, and integrative modeling

genetics more details view paper
  • Downloaded 2,826 times
  • Download rankings, all-time:
    • Site-wide: 1,276 out of 65,353
    • In genetics: 121 out of 3,698
  • Year to date:
    • Site-wide: 7,940 out of 65,353
  • Since beginning of last month:
    • Site-wide: 28,011 out of 65,353

Polycomb-Mediated Chromatin Loops Revealed by a Sub-Kilobase Resolution Chromatin Interaction Map

molecular biology more details view paper
  • Downloaded 1,782 times
  • Download rankings, all-time:
    • Site-wide: 2,854 out of 65,353
    • In molecular biology: 79 out of 2,070
  • Year to date:
    • Site-wide: 40,680 out of 65,353
  • Since beginning of last month:
    • Site-wide: 45,620 out of 65,353

A Cell Type-Specific Class of Chromatin Loops Anchored at Large DNA Methylation Nadirs

genomics more details view paper
  • Downloaded 1,610 times
  • Download rankings, all-time:
    • Site-wide: 3,392 out of 65,353
    • In genomics: 647 out of 4,462
  • Year to date:
    • Site-wide: 14,141 out of 65,353
  • Since beginning of last month:
    • Site-wide: 12,519 out of 65,353

Static And Dynamic DNA Loops Form AP-1 Bound Activation Hubs During Macrophage Development

genomics more details view paper
  • Downloaded 1,474 times
  • Download rankings, all-time:
    • Site-wide: 3,940 out of 65,353
    • In genomics: 725 out of 4,462
  • Year to date:
    • Site-wide: 31,293 out of 65,353
  • Since beginning of last month:
    • Site-wide: 37,145 out of 65,353

The Hi-Culfite assay reveals relationships between chromatin contacts and DNA methylation state

genomics more details view paper
  • Downloaded 947 times
  • Download rankings, all-time:
    • Site-wide: 8,163 out of 65,353
    • In genomics: 1,276 out of 4,462
  • Year to date:
    • Site-wide: 7,344 out of 65,353
  • Since beginning of last month:
    • Site-wide: 19,794 out of 65,353

Cohesin depleted cells pass through mitosis and reconstitute a functional nuclear architecture

cell biology more details view paper
  • Downloaded 807 times
  • Download rankings, all-time:
    • Site-wide: 10,465 out of 65,353
    • In cell biology: 391 out of 3,142
  • Year to date:
    • Site-wide: 2,537 out of 65,353
  • Since beginning of last month:
    • Site-wide: 120 out of 65,353

ESCO1 and CTCF enable formation of long chromatin loops by protecting cohesinSTAG1 from WAPL

cell biology more details view paper
  • Downloaded 723 times
  • Download rankings, all-time:
    • Site-wide: 12,303 out of 65,353
    • In cell biology: 481 out of 3,142
  • Year to date:
    • Site-wide: 3,092 out of 65,353
  • Since beginning of last month:
    • Site-wide: 628 out of 65,353

A Transferable Model For Chromosome Architecture

biophysics more details view paper
  • Downloaded 694 times
  • Download rankings, all-time:
    • Site-wide: 13,078 out of 65,353
    • In biophysics: 400 out of 2,757
  • Year to date:
    • Site-wide: 54,257 out of 65,353
  • Since beginning of last month:
    • Site-wide: 46,349 out of 65,353

CTCF looping is established during gastrulation in medaka embryos

genomics more details view paper
  • Downloaded 493 times
  • Download rankings, all-time:
    • Site-wide: 20,673 out of 65,353
    • In genomics: 2,371 out of 4,462
  • Year to date:
    • Site-wide: 14,570 out of 65,353
  • Since beginning of last month:
    • Site-wide: 24,545 out of 65,353

Juicebox.js provides a cloud-based visualization system for Hi-C data

bioinformatics more details view paper
  • Downloaded 414 times
  • Download rankings, all-time:
    • Site-wide: 25,305 out of 65,353
    • In bioinformatics: 3,501 out of 6,477
  • Year to date:
    • Site-wide: 58,477 out of 65,353
  • Since beginning of last month:
    • Site-wide: 51,096 out of 65,353

Hi-C yields chromosome-length scaffolds for a legume genome, Trifolium subterraneum

genomics more details view paper
  • Downloaded 370 times
  • Download rankings, all-time:
    • Site-wide: 28,556 out of 65,353
    • In genomics: 2,896 out of 4,462
  • Year to date:
    • Site-wide: 18,391 out of 65,353
  • Since beginning of last month:
    • Site-wide: 28,378 out of 65,353

EndoC-βH1 multi-genomic profiling defines gene regulatory programs governing human pancreatic β cell identity and function

genomics more details view paper
  • Downloaded 367 times
  • Download rankings, all-time:
    • Site-wide: 28,840 out of 65,353
    • In genomics: 2,911 out of 4,462
  • Year to date:
    • Site-wide: 23,742 out of 65,353
  • Since beginning of last month:
    • Site-wide: 18,331 out of 65,353

Chromatin is frequently unknotted at the megabase scale

bioinformatics more details view paper
  • Downloaded 196 times
  • Download rankings, all-time:
    • Site-wide: 47,071 out of 65,353
    • In bioinformatics: 5,272 out of 6,477
  • Year to date:
    • Site-wide: 23,686 out of 65,353
  • Since beginning of last month:
    • Site-wide: 7,912 out of 65,353

Clean lighting leads to decreased indoor air pollution and improved respiratory health in rural Uganda

epidemiology more details view paper
  • Downloaded 109 times
  • Download rankings, all-time:
    • Site-wide: 58,925 out of 65,353
    • In epidemiology: 1,403 out of 1,556
  • Year to date:
    • Site-wide: 49,663 out of 65,353
  • Since beginning of last month:
    • Site-wide: 50,363 out of 65,353

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