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Author: Florian Markowetz

Rankings

  • All-time downloads: 33,223 (rank: 1,346 out of 396,821)
  • Categories:
    • bioengineering: 351 (rank: 6,324 (tie) out of 11,728)
    • bioinformatics: 3,017 (rank: 3,480 (tie) out of 33,782)
    • cancer biology: 26,309 (rank: 20 out of 27,573)
    • genomics: 2,438 (rank: 7,982 out of 42,173)
    • neuroscience: 1,108 (rank: 15,108 (tie) out of 66,358)

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Preprints

The evolutionary history of 2,658 cancers

cancer biology more details view paper
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    • Site-wide: 286 out of 92,928
    • In cancer biology: 7 out of 3,287
  • Year to date:
    • Site-wide: 1,663 out of 92,928
  • Since beginning of last month:
    • Site-wide: 11,522 out of 92,928

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
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    • Site-wide: 797 out of 92,928
    • In cancer biology: 23 out of 3,287
  • Year to date:
    • Site-wide: 1,821 out of 92,928
  • Since beginning of last month:
    • Site-wide: 3,369 out of 92,928

Copy-number signatures and mutational processes in ovarian carcinoma

cancer biology more details view paper
  • Downloaded 3,223 times
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    • Site-wide: 1,709 out of 92,928
    • In cancer biology: 45 out of 3,287
  • Year to date:
    • Site-wide: 18,843 out of 92,928
  • Since beginning of last month:
    • Site-wide: 14,025 out of 92,928

Neutral tumor evolution?

cancer biology more details view paper
  • Downloaded 2,003 times
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    • Site-wide: 3,789 out of 92,928
    • In cancer biology: 82 out of 3,287
  • Year to date:
    • Site-wide: 60,693 out of 92,928
  • Since beginning of last month:
    • Site-wide: 51,063 out of 92,928

Novel Quantitative ChIP-seq Methods Measure Absolute Fold-Change in ER Binding Upon Fulvestrant Treatment

genomics more details view paper
  • Downloaded 1,956 times
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    • Site-wide: 3,947 out of 92,928
    • In genomics: 690 out of 5,856
  • Year to date:
    • Site-wide: 18,273 out of 92,928
  • Since beginning of last month:
    • Site-wide: 41,264 out of 92,928

SVclone: inferring structural variant cancer cell fraction

cancer biology more details view paper
  • Downloaded 1,732 times
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    • Site-wide: 4,826 out of 92,928
    • In cancer biology: 116 out of 3,287
  • Year to date:
    • Site-wide: 31,932 out of 92,928
  • Since beginning of last month:
    • Site-wide: 23,612 out of 92,928

Immuno-phenotypes of Pancreatic Ductal Adenocarcinoma: Metaanalysis of transcriptional subtypes

cancer biology more details view paper
  • Downloaded 1,270 times
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    • Site-wide: 8,103 out of 92,928
    • In cancer biology: 221 out of 3,287
  • Year to date:
    • Site-wide: 43,685 out of 92,928
  • Since beginning of last month:
    • Site-wide: 43,586 out of 92,928

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

cancer biology more details view paper
  • Downloaded 1,120 times
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    • Site-wide: 9,983 out of 92,928
    • In cancer biology: 271 out of 3,287
  • Year to date:
    • Site-wide: 21,816 out of 92,928
  • Since beginning of last month:
    • Site-wide: 18,434 out of 92,928

Ccube: A fast and robust method for estimating cancer cell fractions

bioinformatics more details view paper
  • Downloaded 1,062 times
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    • Site-wide: 10,884 out of 92,928
    • In bioinformatics: 1,771 out of 8,701
  • Year to date:
    • Site-wide: 9,178 out of 92,928
  • Since beginning of last month:
    • Site-wide: 8,489 out of 92,928

Intra-tumor heterogeneity defines treatment-resistant HER2+ breast tumors

cancer biology more details view paper
  • Downloaded 875 times
  • Download rankings, all-time:
    • Site-wide: 14,839 out of 92,928
    • In cancer biology: 429 out of 3,287
  • Year to date:
    • Site-wide: 16,412 out of 92,928
  • Since beginning of last month:
    • Site-wide: 28,152 out of 92,928

The small molecule KHS101 induces bioenergetic dysfunction in glioblastoma cells through inhibition of mitochondrial HSPD1

cancer biology more details view paper
  • Downloaded 790 times
  • Download rankings, all-time:
    • Site-wide: 17,349 out of 92,928
    • In cancer biology: 525 out of 3,287
  • Year to date:
    • Site-wide: 46,422 out of 92,928
  • Since beginning of last month:
    • Site-wide: 47,187 out of 92,928

Causal Modeling Dissects Tumour–Microenvironment Interactions In Breast Cancer

bioinformatics more details view paper
  • Downloaded 708 times
  • Download rankings, all-time:
    • Site-wide: 20,479 out of 92,928
    • In bioinformatics: 2,980 out of 8,701
  • Year to date:
    • Site-wide: 56,365 out of 92,928
  • Since beginning of last month:
    • Site-wide: 76,551 out of 92,928

Low Perfusion Compartments in Glioblastoma Quantified by Advanced Magnetic Resonance Imaging and Correlated with Patient Survival

neuroscience more details view paper
  • Downloaded 660 times
  • Download rankings, all-time:
    • Site-wide: 22,694 out of 92,928
    • In neuroscience: 3,757 out of 16,535
  • Year to date:
    • Site-wide: 34,486 out of 92,928
  • Since beginning of last month:
    • Site-wide: 19,504 out of 92,928

Allele-specific multi-sample copy number segmentation

bioinformatics more details view paper
  • Downloaded 632 times
  • Download rankings, all-time:
    • Site-wide: 24,152 out of 92,928
    • In bioinformatics: 3,371 out of 8,701
  • Year to date:
    • Site-wide: 38,421 out of 92,928
  • Since beginning of last month:
    • Site-wide: 35,826 out of 92,928

Estimating cellular pathways from an ensemble of heterogeneous data sources

genomics more details view paper
  • Downloaded 482 times
  • Download rankings, all-time:
    • Site-wide: 34,206 out of 92,928
    • In genomics: 3,337 out of 5,856
  • Year to date:
    • Site-wide: 80,007 out of 92,928
  • Since beginning of last month:
    • Site-wide: 87,965 out of 92,928

BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes

cancer biology more details view paper
  • Downloaded 462 times
  • Download rankings, all-time:
    • Site-wide: 36,027 out of 92,928
    • In cancer biology: 1,153 out of 3,287
  • Year to date:
    • Site-wide: 69,943 out of 92,928
  • Since beginning of last month:
    • Site-wide: 51,318 out of 92,928

Intratumoral Heterogeneity of Tumor Infiltration of Glioblastoma Revealed by Joint Histogram Analysis of Diffusion Tensor Imaging

neuroscience more details view paper
  • Downloaded 448 times
  • Download rankings, all-time:
    • Site-wide: 37,363 out of 92,928
    • In neuroscience: 6,411 out of 16,535
  • Year to date:
    • Site-wide: 59,567 out of 92,928
  • Since beginning of last month:
    • Site-wide: 62,982 out of 92,928

Genome-wide Estrogen Receptor-alpha activation is sustained, not cyclical

cancer biology more details view paper
  • Downloaded 418 times
  • Download rankings, all-time:
    • Site-wide: 40,317 out of 92,928
    • In cancer biology: 1,292 out of 3,287
  • Year to date:
    • Site-wide: 71,576 out of 92,928
  • Since beginning of last month:
    • Site-wide: 51,031 out of 92,928

frenchFISH: Poisson models for quantifying DNA copy-number from fluorescence in situ hybridisation of tissue sections

bioinformatics more details view paper
  • Downloaded 358 times
  • Download rankings, all-time:
    • Site-wide: 47,245 out of 92,928
    • In bioinformatics: 5,481 out of 8,701
  • Year to date:
    • Site-wide: 45,876 out of 92,928
  • Since beginning of last month:
    • Site-wide: 65,839 out of 92,928

3D-printed moulds for image-guided surgical biopsies: an open source computational platform

bioengineering more details view paper
  • Downloaded 351 times
  • Download rankings, all-time:
    • Site-wide: 48,220 out of 92,928
    • In bioengineering: 939 out of 2,109
  • Year to date:
    • Site-wide: 25,692 out of 92,928
  • Since beginning of last month:
    • Site-wide: 27,074 out of 92,928

Multi-Parametric and Multi-Regional Histogram Analysis of MRI: Revealing Imaging Phenotypes of Glioblastoma Correlated with Patient Survival

bioinformatics more details view paper
  • Downloaded 257 times
  • Download rankings, all-time:
    • Site-wide: 62,122 out of 92,928
    • In bioinformatics: 6,594 out of 8,701
  • Year to date:
    • Site-wide: 69,413 out of 92,928
  • Since beginning of last month:
    • Site-wide: 38,000 out of 92,928

ZMIZ1 - A novel Estrogen Receptor co-activator that enhances the growth of ER+ breast cancer

cancer biology more details view paper
  • Downloaded 181 times
  • Download rankings, all-time:
    • Site-wide: 75,108 out of 92,928
    • In cancer biology: 2,531 out of 3,287
  • Year to date:
    • Site-wide: 47,180 out of 92,928
  • Since beginning of last month:
    • Site-wide: 27,126 out of 92,928

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