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Author: Florian Markowetz

Rankings

  • All-time downloads: 32,126 (rank: 1,217 out of 363,737)
  • Categories:
    • bioengineering: 318 (rank: 6,050 (tie) out of 10,144)
    • bioinformatics: 2,810 (rank: 3,480 (tie) out of 31,455)
    • cancer biology: 25,575 (rank: 21 out of 24,736)
    • genomics: 2,387 (rank: 7,574 (tie) out of 39,235)
    • neuroscience: 1,036 (rank: 14,632 (tie) out of 61,189)

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Preprints

The evolutionary history of 2,658 cancers

cancer biology more details view paper
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    • In cancer biology: 6 out of 2,962
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    • Site-wide: 1,079 out of 84,502
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    • Site-wide: 5,008 out of 84,502

Characterizing genetic intra-tumor heterogeneity across 2,658 human cancer genomes

cancer biology more details view paper
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    • Site-wide: 786 out of 84,502
    • In cancer biology: 23 out of 2,962
  • Year to date:
    • Site-wide: 1,777 out of 84,502
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    • Site-wide: 1,506 out of 84,502

Copy-number signatures and mutational processes in ovarian carcinoma

cancer biology more details view paper
  • Downloaded 3,153 times
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    • Site-wide: 1,556 out of 84,502
    • In cancer biology: 42 out of 2,962
  • Year to date:
    • Site-wide: 20,305 out of 84,502
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    • Site-wide: 22,845 out of 84,502

Neutral tumor evolution?

cancer biology more details view paper
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    • In cancer biology: 76 out of 2,962
  • Year to date:
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    • Site-wide: 64,199 out of 84,502

Novel Quantitative ChIP-seq Methods Measure Absolute Fold-Change in ER Binding Upon Fulvestrant Treatment

genomics more details view paper
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    • Site-wide: 3,659 out of 84,502
    • In genomics: 665 out of 5,454
  • Year to date:
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    • Site-wide: 13,122 out of 84,502

SVclone: inferring structural variant cancer cell fraction

cancer biology more details view paper
  • Downloaded 1,696 times
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    • In cancer biology: 111 out of 2,962
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    • Site-wide: 20,237 out of 84,502

Immuno-phenotypes of Pancreatic Ductal Adenocarcinoma: Metaanalysis of transcriptional subtypes

cancer biology more details view paper
  • Downloaded 1,243 times
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    • In cancer biology: 205 out of 2,962
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    • Site-wide: 43,386 out of 84,502

VULCAN integrates ChIP-seq with patient-derived co-expression networks to identify GRHL2 as a key co-regulator of ERa at enhancers in breast cancer

cancer biology more details view paper
  • Downloaded 1,062 times
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    • Site-wide: 9,735 out of 84,502
    • In cancer biology: 266 out of 2,962
  • Year to date:
    • Site-wide: 22,019 out of 84,502
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    • Site-wide: 16,888 out of 84,502

Ccube: A fast and robust method for estimating cancer cell fractions

bioinformatics more details view paper
  • Downloaded 963 times
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    • Site-wide: 11,435 out of 84,502
    • In bioinformatics: 1,862 out of 8,105
  • Year to date:
    • Site-wide: 9,071 out of 84,502
  • Since beginning of last month:
    • Site-wide: 10,384 out of 84,502

Intra-tumor heterogeneity defines treatment-resistant HER2+ breast tumors

cancer biology more details view paper
  • Downloaded 830 times
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    • Site-wide: 14,355 out of 84,502
    • In cancer biology: 411 out of 2,962
  • Year to date:
    • Site-wide: 13,508 out of 84,502
  • Since beginning of last month:
    • Site-wide: 12,856 out of 84,502

The small molecule KHS101 induces bioenergetic dysfunction in glioblastoma cells through inhibition of mitochondrial HSPD1

cancer biology more details view paper
  • Downloaded 769 times
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    • Site-wide: 16,141 out of 84,502
    • In cancer biology: 485 out of 2,962
  • Year to date:
    • Site-wide: 39,342 out of 84,502
  • Since beginning of last month:
    • Site-wide: 31,701 out of 84,502

Causal Modeling Dissects Tumour–Microenvironment Interactions In Breast Cancer

bioinformatics more details view paper
  • Downloaded 698 times
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    • Site-wide: 18,653 out of 84,502
    • In bioinformatics: 2,763 out of 8,105
  • Year to date:
    • Site-wide: 42,852 out of 84,502
  • Since beginning of last month:
    • Site-wide: 50,494 out of 84,502

Low Perfusion Compartments in Glioblastoma Quantified by Advanced Magnetic Resonance Imaging and Correlated with Patient Survival

neuroscience more details view paper
  • Downloaded 612 times
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    • Site-wide: 22,597 out of 84,502
    • In neuroscience: 3,782 out of 15,046
  • Year to date:
    • Site-wide: 37,096 out of 84,502
  • Since beginning of last month:
    • Site-wide: 39,830 out of 84,502

Allele-specific multi-sample copy number segmentation

bioinformatics more details view paper
  • Downloaded 583 times
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    • Site-wide: 24,175 out of 84,502
    • In bioinformatics: 3,375 out of 8,105
  • Year to date:
    • Site-wide: 43,772 out of 84,502
  • Since beginning of last month:
    • Site-wide: 31,102 out of 84,502

Estimating cellular pathways from an ensemble of heterogeneous data sources

genomics more details view paper
  • Downloaded 472 times
  • Download rankings, all-time:
    • Site-wide: 31,564 out of 84,502
    • In genomics: 3,161 out of 5,454
  • Year to date:
    • Site-wide: 70,890 out of 84,502
  • Since beginning of last month:
    • Site-wide: 74,513 out of 84,502

BaalChIP: Bayesian analysis of allele-specific transcription factor binding in cancer genomes

cancer biology more details view paper
  • Downloaded 445 times
  • Download rankings, all-time:
    • Site-wide: 33,833 out of 84,502
    • In cancer biology: 1,077 out of 2,962
  • Year to date:
    • Site-wide: 64,358 out of 84,502
  • Since beginning of last month:
    • Site-wide: 59,151 out of 84,502

Intratumoral Heterogeneity of Tumor Infiltration of Glioblastoma Revealed by Joint Histogram Analysis of Diffusion Tensor Imaging

neuroscience more details view paper
  • Downloaded 424 times
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    • Site-wide: 35,800 out of 84,502
    • In neuroscience: 6,169 out of 15,046
  • Year to date:
    • Site-wide: 58,049 out of 84,502
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    • Site-wide: 59,544 out of 84,502

Genome-wide Estrogen Receptor-alpha activation is sustained, not cyclical

cancer biology more details view paper
  • Downloaded 400 times
  • Download rankings, all-time:
    • Site-wide: 38,146 out of 84,502
    • In cancer biology: 1,201 out of 2,962
  • Year to date:
    • Site-wide: 68,454 out of 84,502
  • Since beginning of last month:
    • Site-wide: 66,829 out of 84,502

frenchFISH: Poisson models for quantifying DNA copy-number from fluorescence in situ hybridisation of tissue sections

bioinformatics more details view paper
  • Downloaded 333 times
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    • Site-wide: 45,610 out of 84,502
    • In bioinformatics: 5,315 out of 8,105
  • Year to date:
    • Site-wide: 40,838 out of 84,502
  • Since beginning of last month:
    • Site-wide: 38,331 out of 84,502

3D-printed moulds for image-guided surgical biopsies: an open source computational platform

bioengineering more details view paper
  • Downloaded 318 times
  • Download rankings, all-time:
    • Site-wide: 47,652 out of 84,502
    • In bioengineering: 912 out of 1,853
  • Year to date:
    • Site-wide: 21,102 out of 84,502
  • Since beginning of last month:
    • Site-wide: 28,687 out of 84,502

Multi-Parametric and Multi-Regional Histogram Analysis of MRI: Revealing Imaging Phenotypes of Glioblastoma Correlated with Patient Survival

bioinformatics more details view paper
  • Downloaded 233 times
  • Download rankings, all-time:
    • Site-wide: 60,060 out of 84,502
    • In bioinformatics: 6,395 out of 8,105
  • Year to date:
    • Site-wide: 71,594 out of 84,502
  • Since beginning of last month:
    • Site-wide: 66,796 out of 84,502

ZMIZ1 - A novel Estrogen Receptor co-activator that enhances the growth of ER+ breast cancer

cancer biology more details view paper
  • Downloaded 149 times
  • Download rankings, all-time:
    • Site-wide: 73,823 out of 84,502
    • In cancer biology: 2,503 out of 2,962
  • Year to date:
    • Site-wide: 46,594 out of 84,502
  • Since beginning of last month:
    • Site-wide: 50,961 out of 84,502

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